Biomedical Engineering Department

2017

Learning Population and subject-specific brain connectivity networks via mixed neighborhood selection

Monti, R. P., Anagnostopoulos, C. & Montana, G., Dec 2017, In: Annals of Applied Statistics. 11, 4, p. 2142-2164 23 p.

Research output: Contribution to journal › Article › peer-review

9 Citations (Scopus)

Liver stiffness values are lower in pediatric subjects than in adults and increase with age: A multifrequency MR elastography study

Etchell, E., Jugé, L., Hatt, A., Sinkus, R. & Bilston, L. E., 1 Apr 2017, In: Radiology. 283, 1, p. 222-230 9 p.

Research output: Contribution to journal › Article › peer-review

36 Citations (Scopus)

Localisation of multiple non-isolated microbubbles with frequency decomposition in super-resolution imaging

Harput, S., Christensen-Jeffries, K., Brown, J., Eckersley, R. J., Dunsby, C. & Tang, M. X., 31 Oct 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8091727

Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

1 Citation (Scopus)

Long-term impact of the low-FODMAP diet on gastrointestinal symptoms, dietary intake, patient acceptability, and healthcare utilization in irritable bowel syndrome

O'Keeffe, M., Jansen, C., Martin, L., Williams, M., Seamark, L., Staudacher, H. M., Irving, P. M., Whelan, K. & Lomer, M. C., 14 Jul 2017, (E-pub ahead of print) In: Neurogastroenterology and Motility.

Research output: Contribution to journal › Article › peer-review

Open Access

File

163 Citations (Scopus)

585 Downloads (Pure)

Machine learning shows association between genetic variability in PPARG and cerebral connectivity in preterm infants

Krishnan, M. L., Wang, Z., Aljabar, P., Ball, G., Mirza, G., Saxena, A., Counsell, S. J., Hajnal, J. V., Montana, G. & Edwards, A. D., 26 Dec 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 52, p. 13744-13749

Research output: Contribution to journal › Article › peer-review

Open Access

File

26 Citations (Scopus)

200 Downloads (Pure)

Magnetic resonance elastography shear wave velocity correlates with liver fibrosis and hepatic venous pressure gradient in adults with advanced liver disease

Gharib, A. M., Han, M. A. T., Meissner, E. G., Kleiner, D. E., Zhao, X., McLaughlin, M., Matthews, L., Rizvi, B., Abd-Elmoniem, K. Z., Sinkus, R., Levy, E., Koh, C., Myers, R. P., Subramanian, G. M., Kottilil, S., Heller, T., Kovacs, J. A. & Morse, C. G., 5 Apr 2017, In: BioMed Research International. 2017, 2067479.

Research output: Contribution to journal › Article › peer-review

Open Access

File

35 Citations (Scopus)

190 Downloads (Pure)

Mapping effective connectivity in the human brain with concurrent intracranial electrical stimulation and BOLD-fMRI

Oya, H., Howard, M. A., Magnotta, V. A., Kruger, A., Griffiths, T. D., Lemieux, L., Carmichael, D. W., Petkov, C. I., Kawasaki, H., Kovach, C. K., Sutterer, M. J. & Adolphs, R., 1 Feb 2017, In: Journal of Neuroscience Methods. 277, p. 101-112 12 p.

Research output: Contribution to journal › Article › peer-review

32 Citations (Scopus)

Martin Black Prize Presentation

Charlton, P. H. & Bonnici, T., 14 Sept 2017

Research output: Non-textual form › Lecture

Open Access

Mass Transportation for Deformable Image Registration with Application to Lung CT

Papież, B. W., Brady, S. M. & Schnabel, J. A., 2017, In: Molecular Imaging, Reconstruction and Analysis of Moving Body Organs, and Stroke Imaging and Treatment. p. 66-74

Research output: Contribution to journal › Article › peer-review

Maximum likelihood estimation of cardiac fiber bundle orientation from arbitrarily spaced diffusion weighted images

Nagler, A., Bertoglio, C., Stoeck, C. T., Kozerke, S. & Wall, W. A., 4 Apr 2017, (E-pub ahead of print) In: Medical Image Analysis.

Research output: Contribution to journal › Article › peer-review

Open Access

File

9 Citations (Scopus)

328 Downloads (Pure)

Medium-term Results of Venous Stenting for Acute Ilio-femoral Vein Thrombosis

Silickas, J., Saha, P., Smith, A., Gwozdz, A., Hunt, B., Cohen, B., Breen, K., McDonald, V., Karunanithy, N. & Black, S., 26 Oct 2017, (E-pub ahead of print) In: European Journal of Vascular and Endovascular Surgery. 54, 5, p. 664 1 p.

Research output: Contribution to journal › Article › peer-review

Methodologies for Quantitative Systems Pharmacology (QSP) Models: Design and Estimation

Ribba, B., Grimm, H., Agoram, B., Davies, M., Gadkar, K., Niederer, S., van Riel, N., Timmis, J. & van der Graaf, P., 6 Jun 2017, (E-pub ahead of print) In: CPT: Pharmacometrics and Systems Pharmacology.

Research output: Contribution to journal › Article › peer-review

Open Access

File

30 Citations (Scopus)

272 Downloads (Pure)

Microbubble Axial Localization Errors in Ultrasound Super-Resolution Imaging

Christensen-Jeffries, K., Harput, S., Brown, J., Wells, P. N. T., Aljabar, P., Dunsby, C., Tang, M. X. & Eckersley, R. J., Nov 2017, In: IEEE TRANSACTIONS ON ULTRASONICS FERROELECTRICS AND FREQUENCY CONTROL. 64, 11, p. 1644-1654

Research output: Contribution to journal › Article › peer-review

Open Access

File

76 Citations (Scopus)

257 Downloads (Pure)

ML and MAP PET reconstruction with MR-voxel sizes for simultaneous PET-MR

Belzunce, M. A., Mehranian, A., Bland, J. & Reader, A. J., 2017, (Accepted/In press) 2017 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC).

Research output: Chapter in Book/Report/Conference proceeding › Conference paper

File

260 Downloads (Pure)

Model-free position control for cardiac ablation catheter steering using electromagnetic position tracking and tension feedback

Back, J., Lindenroth, L., Rhode, K. & Liu, H., 1 May 2017, In: Frontiers Robotics AI. 4, MAY, 17.

Research output: Contribution to journal › Article › peer-review

23 Citations (Scopus)

Modulation of effective refractory period at the infarct border-zone provides a mechanism for focal arrhythmogenesis

Connolly, A., Gawenda, P., Plank, G. & Bishop, M. J., 1 Mar 2017, In: Computing in Cardiology. 43, p. 929-932 4 p.

Research output: Contribution to journal › Conference paper › peer-review

Molecular Imaging of Abdominal Aortic Aneurysms

Brangsch, J., Reimann, C., Collettini, F., Buchert, R., Botnar, R. M. & Makowski, M. R., Feb 2017, In: TRENDS IN MOLECULAR MEDICINE. 23, 2, p. 150-164

Research output: Contribution to journal › Article › peer-review

30 Citations (Scopus)

Morphological three-dimensional analysis of papillary muscles in borderline left ventricles

Velasco Forte, M. N., Nassar, M., Byrne, N., Silva Vieira, M., Pérez, I. V., Ruijsink, B., Simpson, J. & Hussain, T., 1 Sept 2017, In: CARDIOLOGY IN THE YOUNG. 27, 7, p. 1369-1376 8 p.

Research output: Contribution to journal › Article › peer-review

3 Citations (Scopus)

Motion correction in volumetric brain imaging based on DISORDER: Distributed and Incoherent Sample Orders for Reconstruction Disentanglement using Encoding Redundancy

Cordero Grande, L., Ferrazzi, G., Azeredo Gomes Teixeira, R. P., Shahzad, H., Price, A. & Hajnal, J. V., 24 Apr 2017, In: conference abstracts of ISMRM. 25, 4 p.

Research output: Contribution to journal › Meeting abstract › peer-review

File

80 Downloads (Pure)

MR-assisted low dose PET image reconstruction

Mehranian, A., McGinnity, C. J., Prieto Vasquez, C., Hammers, A. & Reader, A. J., 29 May 2017, (E-pub ahead of print) PSMR Conference.

Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

2 Downloads (Pure)

MR-guided joint reconstruction of activity and attenuation in brain PET-MR

Mehranian, A., Zaidi, H. & Reader, A. J., 14 Sept 2017, (E-pub ahead of print) In: NeuroImage. 162, p. 276-288 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

File

29 Citations (Scopus)

191 Downloads (Pure)

Mr-guided PET image denoising

Tahaei, M. S., Reader, A. J. & Collins, D. L., 16 Oct 2017, 2016 IEEE Nuclear Science Symposium, Medical Imaging Conference and Room-Temperature Semiconductor Detector Workshop, NSS/MIC/RTSD 2016. Institute of Electrical and Electronics Engineers Inc., Vol. 2017-January. 8069564

Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

4 Citations (Scopus)

Multimodal image analysis of clinical influences on preterm brain development

Ball, G., Aljabar, P., Nongena, P., Kennea, N., Gonzalez-Cinca, N., Falconer, S., Chew, A. T. M., Harper, N., Wurie, J., Rutherford, M. A., Counsell, S. J. & Edwards, A. D., Aug 2017, In: Annals of Neurology. 82, 2, p. 233-246 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

File

52 Citations (Scopus)

302 Downloads (Pure)

Multi-modal weighted quadratic priors for robust intensity independent synergistic PET-MR reconstruction

Mehranian, A., Belzunce, M. A., McGinnity, C. J., Prieto Vasquez, C., Hammers, A. & Reader, A. J., 3 Jul 2017, (Accepted/In press) IEEE NSS MIC Conference. IEEE, 8532820

Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

Open Access

File

189 Downloads (Pure)

Multi-parametric MRI-guided PET image reconstruction

Mehranian, A. & Reader, A. J., 2017, (Accepted/In press) Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC). 8069446

Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

Open Access

File

1 Citation (Scopus)

210 Downloads (Pure)

Neural Activity Elicited by a Cognitive Task can be Detected in Single-Trials with Simultaneous Intracerebral EEG-fMRI Recordings

Saignavongs, M., Ciumas, C., Petton, M., Bouet, R., Boulogne, S., Rheims, S., Carmichael, D. W., Lachaux, J.-P. & Ryvlin, P., Feb 2017, In: International Journal of Neural Systems. 27, 1, p. 1750001

Research output: Contribution to journal › Article › peer-review

Open Access

File

13 Citations (Scopus)

315 Downloads (Pure)

Neuroanatomical correlates of prion disease progression - a 3T longitudinal voxel-based morphometry study

De Vita, E., Ridgway, G. R., White, M. J., Porter, M.-C., Caine, D., Rudge, P., Collinge, J., Yousry, T. A., Jager, H. R., Mead, S., Thornton, J. S. & Hyare, H., 2017, In: NeuroImage: Clinical. 13, p. 89-96 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

8 Citations (Scopus)

Non-invasive, MRI-based estimation of patient-specific aortic blood pressure using one-dimensional blood flow modelling

Mariscal Harana, J., van Engelen, A., Schneider, T., Florkow, M., Charlton, P., Ruijsink, B., De Bliek, H., Valverde, I., Carakida, M., Pushparajah, K., Sherwin, S., Botnar, R. & Alastruey, J., Dec 2017, In: Artery Research. 20, p. 54-55 2 p.

Research output: Contribution to journal › Meeting abstract › peer-review

Non-invasive characterisation of left atrial substrate in atrial fibrillation patients using multi-modal magnetic resonance imaging

Amaral Varela, M. M., Dillon Murphy, D., Whitaker, J., Chubb, M. H. & Aslanidi, O., 2017, EP Europace. Vol. 19. p. iii184

Research output: Chapter in Book/Report/Conference proceeding › Meeting abstract › peer-review

Noninvasive Personalization of a Cardiac Electrophysiology Model from Body Surface Potential Mapping

Giffard-Roisin, S., Jackson, T., Fovargue, L., Lee, J., Delingette, H., Razavi, R., Ayache, N. & Sermesant, M., 1 Sept 2017, In: IEEE Transactions on Biomedical Engineering. 64, 9, p. 2206-2218 13 p., 7745951.

Research output: Contribution to journal › Article › peer-review

Open Access

File

56 Citations (Scopus)

138 Downloads (Pure)

Non-Invasive whole-body detection of complement activation using radionuclide imaging in a mouse model of myocardial ischaemia-reperfusion injury

Sharif-Paghaleh, E., Clark, J., Yap, M. L., Badar, A., Baguna Torres, J., Puhl, S. L., Blower, P. J., Chuamsaamarkkee, K., Kampmeier, F., Smith, R., Sacks, S. H. & Mullen, G. E. D., 23 Nov 2017, In: Scientific Reports. 7, 1, 16090.

Research output: Contribution to journal › Article › peer-review

Open Access

File

6 Citations (Scopus)

232 Downloads (Pure)

Non-local graph-based regularization for deformable image registration

Papież, B. W., Szmul, A., Grau, V., Brady, J. M. & Schnabel, J. A., 1 Jul 2017, (E-pub ahead of print) Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer Verlag, p. 199-207 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10081 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

5 Citations (Scopus)

'Non-standard' panoramic programmes and the unusual artefacts they produce

Harvey, S., Ball, F., Brown, J. & Thomas, B., 25 Aug 2017, (E-pub ahead of print) In: British Dental Journal. 223, 4, p. 248-252 5 p.

Research output: Contribution to journal › Article › peer-review

6 Citations (Scopus)

Normative biometry of the fetal brain using magnetic resonance imaging

Kyriakopoulou, V., Vatansever, D., Davidson, A., Patkee, P., Elkommos, S., Chew, T. M., Martinez-Biarge, M., Hagberg, B., Mellisa, D., Allsop, J. M., Fox, M., Hajnal, J. V. & Rutherford, M. A., Jul 2017, In: Brain structure & function. 222, 5, p. 2295 - 2307

Research output: Contribution to journal › Article › peer-review

Open Access

File

119 Citations (Scopus)

328 Downloads (Pure)

Novel computational analysis of left atrial anatomy improves prediction of atrial fibrillation recurrence after ablation

Varela, M., Bisbal, F., Zacur, E., Berruezo, A., Aslanidi, O., Mont, L. & Lamata de la Orden, P., 14 Feb 2017, In: Frontiers in Physiology. 8, 68.

Research output: Contribution to journal › Article › peer-review

Open Access

File

58 Citations (Scopus)

257 Downloads (Pure)

Novel looped-catheter-based 2D-3D registration algorithm for MR, 3DRX and X-ray images: Validation study in an ex-vivo heart

Truong, M. V. N., Liu, A., Housden, J., Penney, G., Pop, M. & Rhode, K., 2017, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer‐Verlag Berlin Heidelberg, Vol. 10124 LNCS. p. 152-162 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10124 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

1 Citation (Scopus)

Novel MRI Technique Enables Non-Invasive Measurement of Atrial Wall Thickness

Varela, M., Morgan, R., Theron, A., DIllon-Murphy, D., Chubb, H., Whitaker, J., Henningsson, M., Aljabar, P., Schaeffter, T., Kolbitsch, C. & Aslanidi, O. V., Aug 2017, In: IEEE Transactions on Medical Imaging. 36, 8, p. 1607-1614 8 p., 7898847.

Research output: Contribution to journal › Article › peer-review

Open Access

File

43 Citations (Scopus)

234 Downloads (Pure)

Novel Semiquantitative Bone Marrow Oedema Score and Fracture Score for the Magnetic Resonance Imaging Assessment of the Active Charcot Foot in Diabetes

Meacock, L., Petrova, N. L., Donaldson, A., Isaac, A., Briody, A., Ramnarine, R., Edmonds, M. E. & Elias, D. A., 2017, In: Journal of Diabetes Research. 2017, 8504137.

Research output: Contribution to journal › Article › peer-review

Open Access

17 Citations (Scopus)

Novel surface features for automated detection of focal cortical dysplasias in paediatric epilepsy

Adler, S., Wagstyl, K., Gunny, R., Ronan, L., Carmichael, D., Cross, J. H., Fletcher, P. C. & Baldeweg, T., 2017, In: NeuroImage: Clinical. 14, p. 18-27 10 p.

Research output: Contribution to journal › Article › peer-review

Open Access

96 Citations (Scopus)

Observations With Simultaneous 18F-FDG PET and MR Imaging in Peripheral Artery Disease

Dregely, I., Koppara, T., Nekolla, S. G., Nährig, J., Kuhs, K., Langwieser, N., Dzijan-Horn, M., Ganter, C., Joner, M., Laugwitz, K. L., Schwaiger, M. & Ibrahim, T., 1 Jun 2017, In: JACC. Cardiovascular imaging. 10, 6, p. 709-711 3 p.

Research output: Contribution to journal › Article › peer-review

8 Citations (Scopus)

Optimal control design of turbo spin-echo sequences with applications to parallel-transmit systems

Sbrizzi, A., Hoogduin, H., Hajnal, J. V., van den Berg, C., Luijten, P. & Malik, S. J., Jan 2017, In: Magnetic resonance in medicine. 27 , 1, p. 361-373 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

File

22 Citations (Scopus)

322 Downloads (Pure)

Optimized Amplitude Modulated Multiband RF Pulse Design

Abo Seada, S., Price, A. N., Hajnal, J. V. & Malik, S. J., Dec 2017, In: Magnetic Resonance in Medicine. 78, 6, p. 2185-2193

Research output: Contribution to journal › Article › peer-review

Open Access

File

9 Citations (Scopus)

234 Downloads (Pure)

Orthogonal decomposition of left ventricular remodeling in myocardial infarction

Zhang, X., Medrano-gracia, P., Ambale-venkatesh, B., Bluemke, D. A., Cowan, B. R., Finn, J. P., Kadish, A. H., Lee, D. C., Lima, J. A. C., Young, A. A. & Suinesiaputra, A., 1 Mar 2017, In: Gigascience. 6, 3

Research output: Contribution to journal › Article › peer-review

Open Access

13 Citations (Scopus)

P114 The automatic neuroscientist: Tailoring tACS using real-time fMRI and Bayesian optimization

Lorenz, R., Monti, R. P., Hampshire, A., Koush, Y., Anagnostopoulos, C., Faisal, A., Sharp, D., Montana, G., Leech, R. & Violante, I., Mar 2017, In: Clinical Neurophysiology. 128, 3, p. e69-e70

Research output: Contribution to journal › Article › peer-review

Patient-specific modeling for left ventricular mechanics using data-driven boundary energies

Asner, L., Hadjicharalambous, M., Chabiniok, R., Peressutti, D., Sammut, E., Wong, J., Carr-White, G., Razavi, R., King, A. P., Smith, N., Lee, J. & Nordsletten, D., 1 Feb 2017, In: COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING. 314, p. 269-295

Research output: Contribution to journal › Article › peer-review

Open Access

File

27 Citations (Scopus)

267 Downloads (Pure)

Patterns of recurrence in oesophageal cancer following oesophagectomy in the era of neoadjuvant chemotherapy

Knight, W. R. C., Zylstra, J., Van Hemelrijck, M., Griffin, N., Jacques, A. E. T., Maisey, N., Baker, C. R., Gossage, J. A., Largergren, J. & Davies, A. R., Dec 2017, In: BMJ Open. 1, 6, p. 182-+

Research output: Contribution to journal › Article › peer-review

Personalised biophysical model to optimize left ventricle pacing location for Cardiac Resynchronisation Therapy over time

Lee, A., Sohal, M., Behar, J., Claridge, S., Shetty, A., Jackson, T., Hyde, E., Plank, G., Razavi, R., Lamata, P., Rinaldi, C. A. & Niederer, S., 1 Mar 2017, Computing in Cardiology. IEEE Computer Society Press, Vol. 43. p. 757-759 3 p. 7868853

Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

File

49 Downloads (Pure)

Personalized modeling pipeline for left atrial electromechanics

Fastl, T., Tobon Gomez, C., Crozier, W. A., Whitaker, J., Rajani, R., McCarthy, K. P., Sanchez-Quintana, D., Ho, S. Y., O'Neill, M., Plank, G., Bishop, M. J. & Niederer, S., 1 Mar 2017, Computing in Cardiology Conference, CinC 2016. IEEE Computer Society, Vol. 43. p. 225-228 4 p. 7868720

Research output: Chapter in Book/Report/Conference proceeding › Other chapter contribution › peer-review