Biomedical Engineering & Imaging Sciences

2020

Comparison of Interactions Between Control and Mutant Macrophages

Solis Lemus, J. A., Sanchez Sanchez, B. J., Marcotti, S., Burki, Z. M., Stramer, B. M. & Reyes-Aldasoro, C. C., 24 Jan 2020, Medical Image Understanding and Analysis - 23rd Conference, MIUA 2019, Proceedings: ommunications in Computer and Information Science. Zheng, Y., Williams, B. M. & Chen, K. (eds.). Springer, Cham, Vol. 1065. p. 470-477 8 p. (Communications in Computer and Information Science; vol. 1065 CCIS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

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1 Citation (Scopus)

51 Downloads (Pure)

2019

Acoustic Wave Sparsely-Activated Localization Microscopy (AWSALM): In Vivo Fast Ultrasound Super-Resolution Imaging using Nanodroplets

Zhang, G., Weinberg, P., Dunsby, C., Tang, M. X., Harput, S., Toulemonde, M., Broughton-Venner, J., Zhu, J., Riemer, K., Christensen-Jeffries, K., Brown, J. & Eckersley, R. J., 1 Oct 2019, 2019 IEEE International Ultrasonics Symposium, IUS 2019. IEEE Computer Society, Vol. 2019-October. p. 1930-1933 4 p. 8926069

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

7 Citations (Scopus)

Activation and 3D Imaging of Phase-change Nanodroplet Contrast Agents with a 2D Ultrasound Probe

Harput, S., Zhang, G., Toulemonde, M., Zhu, J., Christensen-Jeffries, K., Brown, J., Eckersley, R. J., Dunsby, C. & Tang, M. X., 1 Oct 2019, 2019 IEEE International Ultrasonics Symposium, IUS 2019. IEEE Computer Society, Vol. 2019-October. p. 2275-2278 4 p. 8925892

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

2 Citations (Scopus)

An Update on Machine Learning in Neuro-Oncology Diagnostics

Booth, T. C., 2 Jan 2019, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries. Crimi, A., van Walsum, T., Kuijf, H., Reyes, M., Bakas, S. & Keyvan, F. (eds.). Springer, Cham, Vol. 11383. p. 37-44 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11383 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

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2 Citations (Scopus)

49 Downloads (Pure)

Coherent Multi-Transducer Ultrasound Imaging with Microbubble Contrast Agents

Christensen-Jeffries, K., Peralta, L., Reinwald, M., Hajnal, J. V. & Eckersley, R. J., 1 Oct 2019, 2019 IEEE International Ultrasonics Symposium, IUS 2019. IEEE Computer Society, Vol. 2019-October. p. 2310-2312 3 p. 8926265

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

6 Citations (Scopus)

Computational Modelling of Electro-Mechanical Coupling in the Atria and Its Changes During Atrial Fibrillation

Monaci, S., Nordsletten, D. & Aslanidi, O., 14 Feb 2019, Lecture Notes in Computer Science: International Workshop on Statistical Atlases and Computational Models of the Heart 2018. Zhao, J., Sermesant, M., Young, A., Rhode, K., Li, S., McLeod, K., Pop, M. & Mansi, T. (eds.). Springer‐Verlag Berlin Heidelberg, Vol. 11395. p. 103-113 10 p.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Citation (Scopus)

Controlling Meshes via Curvature: Spin Transformations for Pose-Invariant Shape Processing

Le Folgoc, L., Castro, D. C., Tan, J., Khanal, B., Kamnitsas, K., Walker, I., Alansary, A. & Glocker, B., 22 May 2019, (E-pub ahead of print) Information Processing in Medical Imaging - 26th International Conference, IPMI 2019, Proceedings. Bao, S., Gee, J. C., Yushkevich, P. A. & Chung, A. C. S. (eds.). p. 221-234 14 p. Chapter 17. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11492 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Deep Learning Based Approach to Quantification of PET Tracer Uptake in Small Tumors

Dal Toso, L., Pfaehler, E., Boellaard, R., Schnabel, J. A. & Marsden, P. K., 2019, Machine Learning for Medical Image Reconstruction - 2nd International Workshop, MLMIR 2019, held in Conjunction with MICCAI 2019, Proceedings. Knoll, F., Maier, A., Rueckert, D. & Ye, J. C. (eds.). Switzerland: Springer, Cham, Vol. 11905. p. 181-192 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11905 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

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1 Citation (Scopus)

155 Downloads (Pure)

Hemodynamic matrix factorization for functional magnetic resonance imaging

Hütel, M., Antonelli, M., Ekanayake, J., Ourselin, S. & Melbourne, A., 1 Jan 2019, Connectomics in NeuroImaging - 3rd International Workshop, CNI 2019, Held in Conjunction with MICCAI 2019, Proceedings. Schirmer, M. D., Chung, A. W., Venkataraman, A., Rekik, I. & Kim, M. (eds.). SPRINGER, p. 117-125 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11848 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Incompressible image registration using divergence-conforming B-splines

Fidon, L., Ebner, M., Garcia-Peraza, L. C. H., Modat, M., Ourselin, S. & Vercauteren, T., 10 Oct 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). p. 438-446 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11765 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

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3 Citations (Scopus)

41 Downloads (Pure)

InSpect: INtegrated SPECTral Component Estimation and Mapping for Multi-contrast Microstructural MRI

Slator, P. J., Hutter, J., Marinescu, R. V., Palombo, M., Young, A. L., Jackson, L. H., Ho, A., Chappell, L. C., Rutherford, M., Hajnal, J. V. & Alexander, D. C., 22 May 2019, Information Processing in Medical Imaging - 26th International Conference, IPMI 2019, Proceedings. Bao, S., Gee, J. C., Yushkevich, P. A. & Chung, A. C. S. (eds.). p. 755-766 12 p. Chapter 59. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11492 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

10 Citations (Scopus)

Learning task-specific and shared representations in medical imaging

Bragman, F. J. S., Tanno, R., Ourselin, S., Alexander, D. C. & Cardoso, M. J., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). SPRINGER, p. 374-383 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11767 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Mechanically Powered Motion Imaging Phantoms: Proof of Concept

Gomez, A., Schmitz, C., Henningsson, M., Housden, J., Noh, Y., Zimmer, V. A., Clough, J. R., Oksuz, I., Toussaint, N., King, A. P. & Schnabel, J. A., 1 Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 2723-2726 4 p. 8856577

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Citation (Scopus)

Minimization of Nanodroplet Activation Time using Focused-Pulses for Droplet-Based Ultrasound Super-Resolution Imaging

Zhang, G., Harput, S., Zhu, J., Christensen-Jeffries, K., Brown, J., Leow, C. H., Dunsby, C., Eckersley, R. J. & Tang, M. X., 1 Oct 2019, 2019 IEEE International Ultrasonics Symposium, IUS 2019. IEEE Computer Society, Vol. 2019-October. p. 372-375 4 p. 8926067

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

5 Citations (Scopus)

Optoelectronic Sensor-based Shape Sensing Approach for Flexible Manipulators

Benjamin Koh, J. H., Jeong, T., Han, S., Li, W., Rhode, K. & Noh, Y., 1 Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 3199-3203 5 p. 8856882

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

8 Citations (Scopus)

Phase-Insensitive Ultrasound Tomography of the Attenuation of Breast Phantoms

Baker, C., Sarno, D., Eckersley, R., Hodnett, M. & Zeqiri, B., 1 Oct 2019, 2019 IEEE International Ultrasonics Symposium, IUS 2019. IEEE Computer Society, Vol. 2019-October. p. 1219-1222 4 p. 8925930

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

4 Citations (Scopus)

Super-Resolution Ultrasound Image Filtering with Machine-Learning to Reduce the Localization Error

Harput, S., Grisan, E., Dunsby, C., Tang, M. X., Fong, L. H., Stanziola, A., Zhang, G., Toulemonde, M., Zhu, J., Christensen-Jeffries, K., Brown, J. & Eckersley, R. J., 1 Oct 2019, 2019 IEEE International Ultrasonics Symposium, IUS 2019. IEEE Computer Society, Vol. 2019-October. p. 2118-2121 4 p. 8925861

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

2 Citations (Scopus)

Towards whole placenta segmentation at late gestation using multi-view ultrasound images

Zimmer, V. A. M., Gomez Herrero, A., Skelton, E., Toussaint, N. A., Zhang, T., Khanal, B., Wright, R., Noh, Y., Ho, A. E. P., Matthew, J., Hajnal, J. V. & Schnabel, J. A., 10 Oct 2019, (E-pub ahead of print) Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Vol. 11768. p. 628-636 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11768 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

14 Citations (Scopus)

Wall-less vascular poly (vinyl) alcohol gel ultrasound imaging phantoms using 3D printed vessels

Xia, W., 1 Jan 2019, Design and Quality for Biomedical Technologies XII. Vargas, G., Liang, R., Pfefer, T. J. & Hwang, J. (eds.). SPIE, Vol. 10870. 108700P

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

14 Citations (Scopus)

2018

An adaptive sampling scheme to efficiently train fully convolutional networks for semantic segmentation

Berger, L., Eoin, H., Cardoso, M. J. & Ourselin, S., 21 Aug 2018, (E-pub ahead of print) Medical Image Understanding and Analysis - 22nd Conference, Proceedings. Springer Verlag, p. 277-286 10 p. (Communications in Computer and Information Science; vol. 894).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

16 Citations (Scopus)

A Study on the Characteristics Influencing the Pressure at the Root of a Distributed One-Dimensional Model of Arterial Blood Flow

Abdullateef, S., Harana, J. M., Alastruey, J. & Khir, A. W., 2018, Computing in Cardiology, CinC 2018, Maastricht, The Netherlands, September 23-26, 2018.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

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Development of a Respiration Monitor Based on Fibre Optics CCD Camera for Small Animal Preclinical Imaging

Osman, D., Fruhwirth, G., Rhode, K. & Noh, Y., 26 Dec 2018, 2018 IEEE SENSORS, SENSORS 2018 - Conference Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-October. 8589828

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Development of Non-Contact Device Based on Optical Fibre Technology for Detecting Respiration of Small Animal in Imaging Instruments

Prompalit, S., Fruhwirth, G., Rhode, K. & Noh, Y., 26 Dec 2018, 2018 IEEE SENSORS, SENSORS 2018 - Conference Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-October. 8589570

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

2017

Ultrasound super-resolution with microbubble contrast agents

Harput, S., Christensen-Jeffries, K., Brown, J., Eckersley, R. J., Dunsby, C. & Tang, M. X., 25 Dec 2017, (E-pub ahead of print) IEEE SENSORS 2017 - Conference Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2017-December. 3 p.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

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1 Citation (Scopus)

241 Downloads (Pure)

2012

Analysis of catheter-based registration with vessel-radius weighting of 3D CT data to 2D X-ray for cardiac catheterisation procedures in a phantom study

Truong, M., Gordon, T., Razavi, R., Penney, G. & Rhode, K. S., 21 Mar 2012, Statistical Atlases and Computational Models of the Heart: Imaging and Modelling Challenges - Second International Workshop, STACOM 2011, Held in Conjunction with MICCAI 2011, Revised Selected Papers. p. 139-148 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7085 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

7 Citations (Scopus)

Automatic cardiac motion tracking using both untagged and 3D tagged MR images

Wang, H., Shi, W., Zhuang, X., Duckett, S., Tung, K., Edwards, P., Razavi, R., Ourselin, S. & Rueckert, D., 21 Mar 2012, Statistical Atlases and Computational Models of the Heart: Imaging and Modelling Challenges - Second International Workshop, STACOM 2011, Held in Conjunction with MICCAI 2011, Revised Selected Papers. p. 45-54 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7085 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

2 Citations (Scopus)

Cardiac unfold: A novel technique for image-guided cardiac catheterization procedures

Ma, Y. L., Karim, R., Housden, R. J., Gijsbers, G., Bullens, R., Rinaldi, C. A., Razavi, R., Schaeffter, T. & Rhode, K. S., 31 Jul 2012, Information Processing in Computer-Assisted Interventions - Third International Conference, IPCAI 2012, Proceedings. p. 104-114 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7330 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

11 Citations (Scopus)

2010

Coupled personalisation of electrophysiology models for simulation of induced ischemic ventricular tachycardia

Relan, J., Chinchapatnam, P., Sermesant, M., Rhode, K., Delingette, H., Razavi, R. & Ayache, N., 22 Nov 2010, Medical Image Computing and Computer-Assisted Intervention, MICCAI2010 - 13th International Conference, Proceedings. PART 2 ed. p. 420-428 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6362 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

9 Citations (Scopus)

Whole heart segmentation of cardiac MRI using multiple path propagation strategy

Zhuang, X., Leung, K., Rhode, K., Razavi, R., Hawkes, D. & Ourselin, S., 22 Nov 2010, Medical Image Computing and Computer-Assisted Intervention, MICCAI2010 - 13th International Conference, Proceedings. PART 1 ed. p. 435-443 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6361 LNCS, no. PART 1).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

16 Citations (Scopus)

2009

2D-3D registration of cardiac images using catheter constraints

Truong, M. V. N., Aslam, A., Ginks, M., Rinaldi, C. A., Rezavi, R., Penney, G. P. & Rhode, K. S., 1 Dec 2009, Computers in Cardiology 2009, CinC 2009. Vol. 36. p. 605-608 4 p. 5445335

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

13 Citations (Scopus)

Biomedical Engineering & Imaging Sciences

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