King's College London

Research portal

Mr Carl Barton

  1. Fast circular dictionary-matching algorithm

    Athar, T., Barton, C., Bland, W., Gao, J., Iliopoulos, C. S., Liu, C. & Pissis, S. P., 2017, In : MATHEMATICAL STRUCTURES IN COMPUTER SCIENCE. 27, 2, p. 143-156 14 p.

    Research output: Contribution to journalArticle

  2. Transcriptome activity of isochores during preimplantation process in human and mouse

    Barton, C., Iliopoulos, C. S., Pissis, S. P. & Arhondakis, S., Jul 2016, In : FEBS Letters. 590, 14, p. 2297-2306 10 p.

    Research output: Contribution to journalArticle

  3. Efficient Index for Weighted Sequences

    Barton, C., Kociumaka, T., Pissis, S. P. & Radoszewski, J., 2016, 27th Annual Symposium on Combinatorial Pattern Matching (CPM 2016). Grossi, R. & Lewenstein, M. (eds.). Dagstuhl, Germany: Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik, Vol. 54. p. 4:1-4:13 13 p. (Leibniz International Proceedings in Informatics (LIPIcs)).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  4. Linear-time computation of prefix table for weighted strings & applications

    Barton, C., Liu, C. & Pissis, S., 2016, In : Theoretical Computer Science. 656, Part B, p. 160 - 172

    Research output: Contribution to journalArticle

  5. Global Sequence Alignment with a Bounded Number of Gaps

    Barton, C., Flouri, T., Iliopoulos, C. S. & Pissis, S. P., 19 Nov 2015, Pattern Recognition in Computational Molecular Biology: Techniques and Approaches. Elloumi, M., Iliopoulos, C. S., Wang, J. T. L. & Zomaya, A. Y. (eds.). Wiley, p. 83-96 14 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  6. Linear-Time Computation of Prefix Table for Weighted Strings

    Barton, C. & Pissis, S., 27 Aug 2015, Combinatorics on Words: 10th International Conference, WORDS 2015, Kiel, Germany, September 14-17, 2015, Proceedings. Manea, F. & Nowotka, D. (eds.). Springer International Publishing, p. 73-84 12 p. (Lecture Notes in Computer Science; vol. 9304).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  7. Accurate and efficient methods to improve multiple circular sequence alignment

    Barton, C., Iliopoulos, C. S., Kundu, R., Pissis, S. P., Retha, A. & Vayani, F., 20 Jun 2015, Experimental Algorithms: 14th International Symposium, SEA 2015, Paris, France, June 29 – July 1, 2015, Proceedings. Bampis, E. (ed.). Springer International Publishing Switzerland, p. 247-258 12 p. (Lecture Notes in Computer Science; vol. 9125).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  8. Global and local sequence alignment with a bounded number of gaps

    Barton, C., Flouri, T., Iliopoulos, C. S. & Pissis, S. P., 31 May 2015, In : Theoretical Computer Science. 582, p. 1-16 16 p.

    Research output: Contribution to journalArticle

  9. Parallelising the Computation of Minimal Absent Words

    Barton, C., Heliou, A., Mouchard, L. & Pissis, S. P., 2 Apr 2015, Parallel Processing and Applied Mathematics: 11th International Conference, PPAM 2015, Krakow, Poland, September 6-9, 2015. Revised Selected Papers, Part II. Wyrzykowski, R., Deelman, E., Dongarra, J., Karczewski, K., Kitowski, J. & Wiatr, K. (eds.). Springer (Reference), Vol. 9574. p. 243-253 11 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingOther chapter contribution

  10. Average-Case Optimal Approximate Circular String Matching

    Barton, C., Iliopoulos, C. S. & Pissis, S. P., 24 Feb 2015, Language and Automata Theory and Applications: 9th International Conference, LATA 2015, Nice, France, March 2-6, 2015, Proceedings. Dediu, A-H., Formenti, E., Martín-Vide, C. & Truthe, B. (eds.). Springer International Publishing, p. 85-96 12 p. (Lecture Notes in Computer Science; vol. 8977).

    Research output: Chapter in Book/Report/Conference proceedingOther chapter contribution

  11. Fast and Simple Computations Using Prefix Tables Under Hamming and Edit Distance

    Barton, C., Iliopoulos, C. S., Pissis, S. P. & Smythe, W., 2015, Combinatorial Algorithms: 25th International Workshop, IWOCA 2014, Duluth, MN, USA, October 15-17, 2014, Revised Selected Papers. Jan, K., Miller, M. & Froncek, D. (eds.). Springer International Publishing, p. 49-61 13 p. (Lecture Notes in Computer Science; vol. 8986).

    Research output: Chapter in Book/Report/Conference proceedingOther chapter contribution

  12. Linear-time computation of minimal absent words using suffix array

    Barton, C., Heliou, A., Mouchard, L. & Pissis, S. P., Dec 2014, In : BMC Bioinformatics. 15, 1, 10 p., 388.

    Research output: Contribution to journalArticle

  13. Optimal computation of all repetitions in a weighted string

    Barton, C. & Pissis, S., 16 Apr 2014, Proceedings of the 2nd International Conference on Algorithms for Big Data. Iliopoulos, C. S. & Langiu, A. (eds.). King's College London, p. 9-15 7 p. (CEUR Workshops Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  14. Fast Algorithms for Approximate Circular String Matching

    Barton, C., Iliopoulos, C. S. & Pissis, S. P., 22 Mar 2014, In : Algorithms for Molecular Biology. 9, 10 p., 9.

    Research output: Contribution to journalArticle

  15. Extending alignments with k-mismatches and ℓ-gaps

    Barton, C., Iliopoulos, C., Lee, I., Mouchard, L., Park, K. & Pissis, S., 13 Mar 2014, In : Journal of Theoretical Computer Science. 525, 9 p.

    Research output: Contribution to journalArticle

  16. Circular string matching revisited

    Barton, C., Iliopoulos, C. S. & Pissis, S. P., 2013, Proceedings of the 14th Italian Conference on Theoretical Computer Science: ICTCS 2013. p. 201-206 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  17. GapsMis: flexible sequence alignment with a bounded number of gaps

    Barton, C., Flouri, T., Iliopoulos, C. S. & Pissis, S. P., 2013, Proceedings of the International Conference on Bioinformatics, Computational Biology and Biomedical Informatics. New York: ACM, p. 402-411 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  18. Identification of all exact and approximate inverted repeats in regular and weighted sequences

    Barton, C., Iliopoulos, C. S., Mulder, N. & Watson, B., 2013, Engineering Applications of Neural Networks: 14th International Conference, EANN 2013, Halkidiki, Greece, September 13-16, 2013 Proceedings, Part II. Springer Berlin Heidelberg, Vol. 384. p. 11-19 9 p. (Communications in Computer and Information Science; vol. 384).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  19. Querying highly similar sequences

    Barton, C., Giraud, M., Iliopoulos, C. S., Lecroq, T., Mouchard, L. & Pissis, S. P., 2013, In : International Journal of Computational Biology and Drug Design. 6, 1, p. 119 - 130 12 p.

    Research output: Contribution to journalArticle

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