@inbook{a9b6788f15924896a62e9f51257e8bd2,
title = "A Fast and Efficient Algorithm for Mapping Short Sequences to a Reference Genome",
abstract = "Novel high-throughput (Deep) sequencing technology methods have redefined the way genome sequencing is performed. They are able to produce tens of millions of short sequences (reads) in a single experiment and with a much lower cost than previous sequencing methods. In this paper, we present a new algorithm for addressing the problem of efficiently mapping millions of short reads to a reference genome. In particular, we define and solve the Massive Approximate Pattern Matching problem for mapping short sequences to a reference genome.",
keywords = "DNA sequences, Genome sequencing, Mapping sequences, Pattern matching, SBS",
author = "Pavlos Antoniou and Iliopoulos, {Costas S.} and Laurent Mouchard and Solon Pissis",
year = "2010",
doi = "10.1007/978-1-4419-5913-3_45",
language = "English",
isbn = "978-1-4419-5912-6",
series = "Advances in Experimental Medicine and Biology",
publisher = "Springer-Verlag Berlin Heidelberg",
pages = "399--403",
editor = "HR Arabnia",
booktitle = "Advances in Computational Biology",
}