A genome-wide RNAi screen identifies the SMC5/6 complex as a non-redundant regulator of a Topo2a-dependent G2 arrest

Katharina Deiss, Nicola Lockwood, Michael Howell, Hendrika Alida Segeren, Rebecca E. Saunders, Probir Chakravarty, Tanya N. Soliman, Silvia Martini, Nuno Rocha, Robert Semple, Lykourgos Panagiotis Zalmas, Peter J. Parker

Research output: Contribution to journalArticlepeer-review

21 Citations (Scopus)

Abstract

The Topo2a-dependent arrest is associated with faithful segregation of sister chromatids and has been identified as dysfunctional in numerous tumour cell lines. This genome-protecting pathway is poorly understood and its characterization is of significant interest, potentially offering interventional opportunities in relation to synthetic lethal behaviours in arrest-defective tumours. Using the catalytic Topo2a inhibitor ICRF193, we have performed a genome-wide siRNA screen in arrest-competent, non-transformed cells, to identify genes essential for this arrest mechanism. In addition, we have counter-screened several DNA-damaging agents and demonstrate that the Topo2a-dependent arrest is genetically distinct from DNA damage checkpoints. We identify the components of the SMC5/6 complex, including the activity of the E3 SUMO ligase NSE2, as non-redundant players that control the timing of the Topo2a-dependent arrest in G2. We have independently verified the NSE2 requirement in fibroblasts from patients with germline mutations that cause severely reduced levels of NSE2. Through imaging Topo2a-dependent G2 arrested cells, an increased interaction between Topo2a and NSE2 is observed at PML bodies, which are known SUMOylation hotspots. We demonstrate that Topo2a is SUMOylated in an ICRF193-dependent manner by NSE2 at a novel non-canonical site (K1520) and that K1520 sumoylation is required for chromosome segregation but not the G2 arrest.

Original languageEnglish
Pages (from-to)2906-2921
Number of pages16
JournalNucleic acids research
Volume47
Issue number6
Early online date24 Dec 2018
DOIs
Publication statusPublished - 8 Apr 2019

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