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PET-BIDS, an extension to the brain imaging data structure for positron emission tomography

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Martin Norgaard, Granville J. Matheson, Hanne D. Hansen, Adam Thomas, Graham Searle, Gaia Rizzo, Mattia Veronese, Alessio Giacomel, Maqsood Yaqub, Matteo Tonietto, Thomas Funck, Ashley Gillman, Hugo Boniface, Alexandre Routier, Jelle R. Dalenberg, Tobey Betthauser, Franklin Feingold, Christopher J. Markiewicz, Krzysztof J. Gorgolewski, Ross W. Blair & 12 more Stefan Appelhoff, Remi Gau, Taylor Salo, Guiomar Niso, Cyril Pernet, Christophe Phillips, Robert Oostenveld, Jean Dominique Gallezot, Richard E. Carson, Gitte M. Knudsen, Robert B. Innis, Melanie Ganz

Original languageEnglish
Article number65
Pages (from-to)65
Number of pages1
JournalScientific Data
Volume9
Issue number1
DOIs
Accepted/In press11 Feb 2022
Published2 Mar 2022

Bibliographical note

Funding Information: We are grateful to the Neurobiology Research Unit, Copenhagen, Denmark, and the Centre for Neuroimaging Sciences, IoPPN, Kings College London, London, UK, for providing the data presented in this manuscript, including uploading it to OpenNeuro. This work was supported by the Novo Nordisk Foundation (NNF20OC0063277) and the NIH (1ZIAMH002977-01). MN was supported by the Independent Research Fund Denmark (DFF-0129-00004B), and MG was supported by the Elsass foundation (18-3-0147). AG is supported by the KCL funded CDT in Data-Driven Health and this represents independent research part funded by the National Institute for Health Research (NIHR) Maudsley Biomedical Research Centre at South London and Maudsley NHS Foundation Trust and King’s College London and part funded by GlaxoSmithKline (GSK). FF, CM, and RB were supported by the National Institute Of Mental Health of the National Institutes of Health (R24MH117179). Funding Information: We are grateful to the Neurobiology Research Unit, Copenhagen, Denmark, and the Centre for Neuroimaging Sciences, IoPPN, Kings College London, London, UK, for providing the data presented in this manuscript, including uploading it to OpenNeuro. This work was supported by the Novo Nordisk Foundation (NNF20OC0063277) and the NIH (1ZIAMH002977-01). MN was supported by the Independent Research Fund Denmark (DFF-0129-00004B), and MG was supported by the Elsass foundation (18-3-0147). AG is supported by the KCL funded CDT in Data-Driven Health and this represents independent research part funded by the National Institute for Health Research (NIHR) Maudsley Biomedical Research Centre at South London and Maudsley NHS Foundation Trust and King?s College London and part funded by GlaxoSmithKline (GSK). FF, CM, and RB were supported by the National Institute Of Mental Health of the National Institutes of Health (R24MH117179).

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Abstract

The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets, serving not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data, also known as PET-BIDS, and share several open-access datasets curated following PET-BIDS along with tools for conversion, validation and analysis of PET-BIDS datasets.

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