Popping Superbubbles and Discovering Clumps: Recent Developments in Biological Sequence Analysis

Costas Iliopoulos*, Ritu Kundu, Manal Mohamed, Fatima Vayani

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference paperpeer-review

4 Citations (Scopus)

Abstract

The information that can be inferred or predicted from knowing the genomic sequence of an organism is astonishing. String algorithms are critical to this process. This paper provides an overview of two particular problems that arise during computational molecular biology research, and recent algorithmic developments in solving them.

Original languageEnglish
Title of host publicationWALCOM: Algorithms and Computation
Subtitle of host publicationLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
PublisherSpringer‐Verlag Berlin Heidelberg
Pages3-14
Number of pages12
Volume9627
ISBN (Print)9783319301389
DOIs
Publication statusPublished - 20 Feb 2016
Event10th International Workshop on Algorithms and Computation, WALCOM 2016 - Kathmandu, Nepal
Duration: 29 Mar 201631 Mar 2016

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume9627
ISSN (Print)03029743
ISSN (Electronic)16113349

Conference

Conference10th International Workshop on Algorithms and Computation, WALCOM 2016
Country/TerritoryNepal
CityKathmandu
Period29/03/201631/03/2016

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