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Research Outputs

  1. 2017
  2. Impaired development of the cerebral cortex in infants with congenital heart disease is correlated to reduced cerebral oxygen delivery

    Kelly, C. J., Makropoulos, A., Cordero-Grande, L., Hutter, J., Price, A., Hughes, E., Murgasova, M., Teixeira, R. P. A. G., Steinweg, J. K., Kulkarni, S., Rahman, L., Zhang, H., Alexander, D. C., Pushparajah, K., Rueckert, D., Hajnal, J. V., Simpson, J., Edwards, A. D., Rutherford, M. A. & Counsell, S. J. 8 Nov 2017 In : Scientific Reports. 7, 1, p. 15088

    Research output: Contribution to journalArticle

  3. Punctate White Matter Lesions Associated With Altered Brain Development And Adverse Motor Outcome In Preterm Infants

    Tusor, N., Benders, M. J., Counsell, S. J., Nongena, P., Ederies, M. A., Falconer, S., Chew, A., Gonzalez-Cinca, N., Hajnal, J. V., Gangadharan, S., Chatzi, V., Kersbergen, K. J., Kennea, N., Azzopardi, D. V. & Edwards, A. D. 16 Oct 2017 In : Scientific Reports. 7, 1, p. 13250 13250

    Research output: Contribution to journalArticle

  4. Dynamic field mapping and motion correction using interleaved double spin-echo diffusion MRI

    Hutter, J., Christiaens, D., Kuklisova-Murgasova, M., Cordero-Grande, L., Slator, P., Price, A., Rutherford, M. & Hajnal, J. V. 1 Oct 2017 Lecture Notes in Computer Science - MICCAI 2017. Vol. 10433 LNCS, p. 523-531 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  5. Context-sensitive super-resolution for fast fetal magnetic resonance imaging

    McDonagh, S., Hou, B., Alansary, A., Oktay, O., Kamnitsas, K., Rutherford, M., Hajnal, J. & Kainz, B. 9 Sep 2017 Molecular Imaging, Reconstruction and Analysis of Moving Body Organs, and Stroke Imaging and Treatment - 5th International Workshop, CMMI 2017 2nd International Workshop, RAMBO 2017 and 1st International Workshop, SWITCH 2017 Held in Conjunction with MICCAI 2017, Proceedings. Springer Verlag, Vol. 10555 LNCS, p. 116-126 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10555 LNCS)

    Research output: Chapter in Book/Report/Conference proceedingOther chapter contribution

  6. Predicting slice-to-volume transformation in presence of arbitrary subject motion

    Hou, B., Alansary, A., McDonagh, S., Davidson, A., Rutherford, M., Hajnal, J. V., Rueckert, D., Glocker, B. & Kainz, B. 4 Sep 2017 Medical Image Computing and Computer Assisted Intervention − MICCAI 2017 - 20th International Conference, Proceedings. Springer Verlag, Vol. 10434 LNCS, p. 296-304 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10434 LNCS)

    Research output: Chapter in Book/Report/Conference proceedingOther chapter contribution

  7. PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI

    Alansary, A., Rajchl, M., McDonagh, S. G., Murgasova, M., Damodaram, M., Lloyd, D. F. A., Davidson, A., Rutherford, M., Hajnal, J. V., Rueckert, D. & Kainz, B. 1 Sep 2017 In : IEEE Transactions on Medical Imaging.

    Research output: Contribution to journalArticle

  8. Quantifying Placental Microcirculation and Microstructure with Anisotropic IVIM Models

    Slator, P. J., Hutter, J., McCabe, L., Santos Gomes, A. D., Price, A. N., Panagiotaki, E., Rutherford, M. A., Hajnal, J. V. & Alexander, D. C. Sep 2017 In : Placenta. 57, p. 290-291 2 p.

    Research output: Contribution to journalArticle

  9. A tract-specific approach to assessing white matter in preterm infants

    Pecheva, D., Yushkevich, P., Batalle, D., Hughes, E., Aljabar, P., Wurie, J., Hajnal, J. V., Edwards, A. D., Alexander, D. C., Counsell, S. J. & Zhang, H. 15 Aug 2017 In : NeuroImage. 157, p. 675-694 20 p.

    Research output: Contribution to journalArticle

  10. Time-efficient and flexible design of optimised multi-shell HARDI diffusion

    Hutter, J., Tournier, J. D., Price, A. N., Cordero-Grande, L., Hughes, E. J., Malik, S., Steinweg, J., Bastiani, M., Sotiropoulos, S. N., Jbabdi, S., Andersson, J., Edwards, A. D. & Hajnal, J. V. 30 May 2017 In : Magnetic Resonance in Medicine.

    Research output: Contribution to journalArticle

  11. A simple optimisation approach to making time efficient VERSE-multiband pulses feasible on non-ideal gradients

    Abo Seada, S., Hajnal, J. V. & Malik, S. J. 20 Apr 2017 A simple optimisation approach to making time efficient VERSE-multiband pulses feasible on non-ideal gradients. 5059

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  12. Root-flipped multiband pulses with inherently aligned echoes

    Abo Seada, S., Hajnal, J. V. & Malik, S. J. 20 Apr 2017 Root-flipped multiband pulses with inherently aligned echoes. 3955

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  13. Early development of structural networks and the impact of prematurity on brain connectivity

    Batalle, D., Hughes, E. J., Zhang, H., Tournier, J. D., Tusor, N., Aljabar, P., Wali, L., Alexander, D. C., Hajnal, J. V., Nosarti, C., Edwards, A. D. & Counsell, S. J. 1 Apr 2017 In : NeuroImage. 149, p. 379-392 14 p.

    Research output: Contribution to journalArticle

  14. Placenta maps: In utero placental health assessment of the human fetus

    Miao, H., Mistelbauer, G., Karimov, A., Alansary, A., Davidson, A., Lloyd, D., Damodaram, M., Story, L., Hutter, J., Hajnal, J. V., Rutherford, M., Preim, B., Kainz, B. & Groller, M. E. 24 Feb 2017 In : IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS. 23, 6, p. 1612-1623 12 p., 7864470

    Research output: Contribution to journalArticle

  15. DeepCut: Object Segmentation from Bounding Box Annotations Using Convolutional Neural Networks

    Rajchl, M., Lee, M. C. H., Oktay, O., Kamnitsas, K., Passerat-Palmbach, J., Bai, W., Damodaram, M., Rutherford, M. A., Hajnal, J. V., Kainz, B. & Rueckert, D. 1 Feb 2017 In : IEEE Transactions on Medical Imaging. 36, 2, p. 674-683 10 p., 7739993

    Research output: Contribution to journalArticle

  16. A deep cascade of convolutional neural networks for MR image reconstruction

    Schlemper, J., Caballero, J., Hajnal, J. V., Price, A. & Rueckert, D. 2017 Information Processing in Medical Imaging - 25th International Conference, IPMI 2017, Proceedings. Springer Verlag, Vol. 10265 LNCS, p. 647-658 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10265 LNCS)

    Research output: Chapter in Book/Report/Conference proceedingOther chapter contribution

  17. 2016
  18. An exploration of task based fMRI in neonates using echo-shifting to allow acquisition at longer TE without loss of temporal efficiency

    Ferrazzi, G., Nunes, R. G., Arichi, T., Gaspar, A., Barone, G., Allievi, A., Vasylechko, S., Abaei, M., Hughes, E., Rueckert, D., Price, A. & Hajnal, J. V. 15 Dec 2016 In : NeuroImage. 127, p. 298–306

    Research output: Contribution to journalArticle

  19. Normative biometry of the fetal brain using magnetic resonance imaging

    Kyriakopoulou, V., Vatansever, D., Davidson, A., Patkee, P. A., Elkommos, S., Chew, T. M., Martinez-Biarge, M., Hagberg, B., Mellisa, D., Allsop, J. M., Fox, M., Hajnal, J. V. & Rutherford, M. A. 24 Nov 2016 In : Brain structure & function. p. 1-13

    Research output: Contribution to journalArticle

  20. Fast fully automatic segmentation of the human placenta from motion corrupted MRI

    Alansary, A., Kamnitsas, K., Davidson, A., Khlebnikov, R., Rajchl, M., Malamateniou, C., Rutherford, M., Hajnal, J. V., Glocker, B., Rueckert, D. & Kainz, B. 2 Oct 2016 Medical Image Computing and Computer-Assisted Intervention – MICCAI 2016. Vol. LNCS 9901, p. 589-597 9 p. (Lecture Notes in Computer Science; vol. 9901)

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  21. Parallel transmission for ultrahigh-field imaging

    Padormo, F., Beqiri, A., Hajnal, J. V. & Malik, S. J. 1 Sep 2016 In : NMR in Biomedicine. 29, 9, p. 1145-1161 17 p.

    Research output: Contribution to journalArticle

  22. Distortion correction in fetal EPI using non-rigid registration with Laplacian constraint

    Murgasova, M., Lockwood estrin , G., Rutherford, M. A., Rueckert, D. & Hajnal, J. V. 15 Jun 2016 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI). IEEE Computer Society Press, Vol. 2016-June, p. 1372-1375 4 p. 7493522

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  23. RF system calibration for global Q matrix determination

    Padormo, F., Beqiri, A., Malik, S. J. & Hajnal, J. V. 1 Jun 2016 In : Magnetic Resonance Imaging. 34, 5, p. 690-693 4 p.

    Research output: Contribution to journalArticle

  24. Regression analysis for assessment of myelination status in preterm brains with magnetic resonance imaging

    Wang, S., Murgasova, M., Hajnal, J. V., Ledig, C. & Schnabel, J. A. Apr 2016 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI). IEEE

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  25. Moderate hypothermia within 6 h of birth plus inhaled xenon versus moderate hypothermia alone after birth asphyxia (TOBY-Xe): a proof-of-concept, open-label, randomised controlled trial

    Azzopardi, D., Robertson, N. J., Bainbridge, A., Cady, E., Charles-Edwards, G., Deierl, A., Fagiolo, G., Franks, N. P., Griffiths, J., Hajnal, J., Juszczak, E., Kapetanakis, B., Linsell, L., Maze, M., Omar, O., Strohm, B., Tusor, N. & Edwards, A. D. Feb 2016 In : Lancet Neurology. 15, 2, p. 145–153

    Research output: Contribution to journalArticle

  26. Regional growth and atlasing of the developing human brain

    Makropoulos, A., Aljabar, P., Wright, R., Hüning, B., Merchant, N., Arichi, T., Tusor, N., Hajnal, J. V., Edwards, A. D., Counsell, S. J. & Rueckert, D. 15 Jan 2016 In : NeuroImage. 125, p. 456-478 23 p.

    Research output: Contribution to journalArticle

  27. Optimal control design of turbo spin-echo sequences with applications to parallel-transmit systems

    Sbrizzi, A., Hoogduin, H., Hajnal, J. V., van den Berg, C., Luijten, P. & Malik, S. J. 2016 In : Magnetic resonance in medicine. p. 1-13 13 p.

    Research output: Contribution to journalArticle

  28. 2015
  29. Automatic brain localization in fetal MRI using superpixel graphs

    Alansary, A., Lee, M., Keraudren, K., Kainz, B., Malamateniou, C., Rutherford, M., Hajnal, J. V., Glocker, B. & Rueckert, D. 30 Dec 2015 Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer-Verlag Berlin Heidelberg, Vol. 9487, p. 13-22 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9487)

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  30. Flexible reconstruction and correction of unpredictable motion from stacks of 2D images

    Kainz, B., Alansary, A., Malamateniou, C., Keraudren, K., Rutherford, M., Hajnal, J. V. & Rueckert, D. 20 Nov 2015 Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer-Verlag Berlin Heidelberg, Vol. 9350, p. 555-562 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9350)

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  31. Automated localization of fetal organs in MRI using random forests with steerable features

    Keraudren, K., Kainz, B., Oktay, O., Kyriakopoulou, V., Rutherford, M. A., Hajnal, J. V. & Rueckert, D. 18 Nov 2015 Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer-Verlag Berlin Heidelberg, Vol. 9351, p. 620-627 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9351)

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  32. Fast reconstruction of accelerated dynamic MRI using manifold kernel regression

    Bhatia, K. K., Caballero, J., Price, A. N., Sun, Y., Hajnal, J. V. & Rueckert, D. 18 Nov 2015 Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer-Verlag Berlin Heidelberg, Vol. 9351, p. 510-518 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9351)

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  33. Super-resolution imaging of microbubble contrast agents

    Eckersley, R. J., Christensen-Jeffries, K., Tang, M. X., Hajnal, J. V., Aljabar, P. & Dunsby, C. 13 Nov 2015 Super-resolution imaging of microbubble contrast agents. Institute of Electrical and Electronics Engineers Inc.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  34. Comparison between simulated decoupling regimes for specific absorption rate prediction in parallel transmit MRI

    Beqiri, A., Hand, J. W., Hajnal, J. V. & Malik, S. J. 1 Nov 2015 Magnetic Resonance in Medicine. John Wiley and Sons Inc., p. 1423-1434 12 p. (Magnetic Resonance in Medicine; vol. 74)

    Research output: Chapter in Book/Report/Conference proceedingChapter

  35. Construction of a fetal spatio-temporal cortical surface atlas from in utero MRI: Application of spectral surface matching

    Wright, R., Makropoulos, A., Kyriakopoulou, V., Patkee, P. A., Koch, L. M., Rutherford, M. A., Hajnal, J. V., Rueckert, D. & Aljabar, P. 15 Oct 2015 In : NeuroImage. 120, p. 467-480 14 p.

    Research output: Contribution to journalArticle

  36. Learning and combining image similarities for neonatal brain population studies

    Zimmer, V. A., Glocker, B., Aljabar, P., Counsell, S., Rutherford, M., Edwards, A. D., Hajnal, J. V., Ballester, M. Á. G., Rueckert, D. & Piella, G. 2 Oct 2015 Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer-Verlag Berlin Heidelberg, Vol. 9352, p. 110-117 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9352)

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  37. Large dynamic range relative B1+ mapping

    Padormo, F., Hess, A. T., Aljabar, P., Malik, S. J., Jezzard, P., Robson, M. D., Hajnal, J. V. & Koopmans, P. J. 26 Aug 2015 In : Magnetic resonance in medicine.

    Research output: Contribution to journalArticle

  38. Correction: Brain Extraction Using Label Propagation and Group Agreement: Pincram

    Heckemann, R. A., Ledig, C., Gray, K. R., Aljabar, P., Rueckert, D., Hajnal, J. V. & Hammers, A. 12 Aug 2015 In : PloS one. 10, 8, e0135746

    Research output: Contribution to journalArticle

  39. Cerebral blood flow measurements in infants using look-locker arterial spin labeling

    Amaral Varela, M., Petersen, E. T., Golay, X. & Hajnal, J. V. Jun 2015 In : Journal of Magnetic Resonance Imaging. 41, 6, p. 1591-1600 11 p.

    Research output: Contribution to journalArticle

  40. Specialization and integration of functional thalamocortical connectivity in the human infant

    Toulmin, H., Beckmann, C. F., O'Muircheartaigh, J., Ball, G., Nongena, P., Makropoulos, A., Ederies, A., Counsell, S. J., Kennea, N., Arichi, T., Tusor, N., Rutherford, M. A., Azzopardi, D., Gonzalez-Cinca, N., Hajnal, J. V. & Edwards, A. D. 19 May 2015 In : Proceedings of the National Academy of Sciences. 112, 20, p. 6485-6490 6 p.

    Research output: Contribution to journalArticle

  41. Adaptive scan strategies for fetal MRI imaging using slice to volume techniques

    Kainz, B., Malamateniou, C., Ferrazzi, G., Kuklisova-Murgasova, M., Egger, J., Keraudren, K., Rutherford, M., Hajnal, J. V. & Rueckert, D. Apr 2015 Adaptive scan strategies for fetal MRI imaging using slice to volume techniques. IEEE, p. 849-852 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

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