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Research Outputs

  1. 2017
  2. Medical-grade sterilizable target for fluid-immersed fetoscope optical distortion calibration

    Nikitichev, D. I., Shakir, D. I., Chadebecq, F., Tella, M., Deprest, J., Stoyanov, D., Ourselin, S. & Vercauteren, T., 23 Feb 2017, In : Journal of Visualized Experiments. 2017, 120, e55298.

    Research output: Contribution to journalArticle

  3. Real-time segmentation of non-rigid surgical tools based on deep learning and tracking

    García-Peraza-Herrera, L. C., Li, W., Gruijthuijsen, C., Devreker, A., Attilakos, G., Deprest, J., Poorten, E. V., Stoyanov, D., Vercauteren, T. & Ourselin, S., 22 Feb 2017, Computer-Assisted and Robotic Endoscopy - 3rd International Workshop, CARE 2016 Held in Conjunction with MICCAI 2016, Revised Selected Papers. Springer Verlag, Vol. 10170 LNCS. p. 84-95 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10170 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  4. Infant adiposity following a randomised controlled trial of a behavioural intervention in obese pregnancy

    Patel, N., Godfrey, K. M., Pasupathy, D., Levin, J., Flynn, A. C., Hayes, L., Briley, A. L., Bell, R., Lawlor, D. A., Oteng-Ntim, E., Nelson, S. M., Robson, S. C., Sattar, N., Singh, C., Wardle, J., White, S., Seed, P. T. & Poston, L., 20 Feb 2017, In : International Journal of Obesity.

    Research output: Contribution to journalArticle

  5. A multi-centre evaluation of eleven clinically feasible brain PET/MRI attenuation correction techniques using a large cohort of patients

    Ladefoged, C. N., Law, I., Anazodo, U., Lawrence, K. S., Izquierdo-Garcia, D., Catana, C., Burgos, N., Cardoso, M. J., Ourselin, S., Hutton, B., Mérida, I., Costes, N., Hammers, A., Benoit, D., Holm, S., Juttukonda, M., An, H., Cabello, J., Lukas, M., Nekolla, S. & 8 others, Ziegler, S., Fenchel, M., Jakoby, B., Casey, M. E., Benzinger, T., Højgaard, L., Hansen, A. E. & Andersen, F. L., 15 Feb 2017, In : NeuroImage. 147, p. 346-359

    Research output: Contribution to journalArticle

  6. An abnormal periventricular magnetization transfer ratio gradient occurs early in multiple sclerosis

    Brown, J. W. L., Pardini, M., Brownlee, W. J., Fernando, K., Samson, R. S., Carrasco, F. P., Ourselin, S., Gandini Wheeler-Kingshott, C. A. M., Miller, D. H. & Chard, D. T., 1 Feb 2017, In : Brain. 140, 2, p. 387-398 12 p.

    Research output: Contribution to journalArticle

  7. GIFT-Cloud: A data sharing and collaboration platform for medical imaging research

    Doel, T., Shakir, D. I., Pratt, R., Aertsen, M., Moggridge, J., Bellon, E., David, A. L., Deprest, J., Vercauteren, T. & Ourselin, S., 1 Feb 2017, In : Computer Methods and Programs in Biomedicine. 139, p. 181-190 10 p.

    Research output: Contribution to journalArticle

  8. Photoacoustic imaging of intracardiac medical devices using internal illumination of carbon nanotube / PDMS composite coatings

    Xia, W., Noimark, S., Maneas, E., Parkin, I., Ourselin, S., Finlay, M. & Desjardins, A., 30 Jan 2017, Photons Plus Ultrasound: Imaging and Sensing 2017, Photonics West.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  9. Point-Spread-Function-Aware Slice-to-Volume Registration: Application to Upper Abdominal MRI Super-Resolution: Application to upper abdominal MRI super-resolution

    Ebner, M., Chouhan, M., Patel, P. A., Atkinson, D., Amin, Z., Read, S., Punwani, S., Taylor, S., Vercauteren, T. & Ourselin, S., 19 Jan 2017, Reconstruction, Segmentation, and Analysis of Medical Images - 1st International Workshops, RAMBO 2016 and HVSMR 2016 Held in Conjunction with MICCAI 2016, Revised Selected Papers. Springer Verlag, Vol. 10129 . p. 3-13 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10129 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  10. Strengths and pitfalls of whole-heart atlas-based segmentation in congenital heart disease patients

    Zuluaga, M. A., Biff, B., Taylor, A. M., Schievano, S., Vercauteren, T. & Ourselin, S., 19 Jan 2017, Reconstruction, Segmentation, and Analysis of Medical Images - 1st International Workshops, RAMBO 2016 and HVSMR 2016 Held in Conjunction with MICCAI 2016, Revised Selected Papers. Springer Verlag, Vol. 10129 LNCS. p. 139-146 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10129 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  11. All-optical pulse-echo ultrasound imaging for guiding minimally invasive procedures

    Desjardins, A., Mosse, C., Colchester, R., Noimark, S., Alles, E., Zhang, E., Ourselin, S., Parkin, I., Papakonstantinou, I., Beard, P. & Finlay, M., 1 Jan 2017, CLEO: Applications and Technology, CLEO_AT 2017. OSA - The Optical Society, Vol. Part F43-CLEO_AT 2017.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  12. Anatomy-driven modelling of spatial correlation for regularisation of arterial spin labelling images

    Owen, D., Melbourne, A., Eaton-Rosen, Z., Thomas, D. L., Marlow, N., Rohrer, J. & Ourselin, S., 1 Jan 2017, Medical Image Computing and Computer Assisted Intervention − MICCAI 2017 - 20th International Conference, Proceedings. Springer Verlag, Vol. 10434 LNCS. p. 190-197 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10434 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  13. Individual analysis of molecular brain imaging data through automatic identification of abnormality patterns

    Burgos, N., Samper-González, J., Bertrand, A., Habert, M. O., Ourselin, S., Durrleman, S., Cardoso, M. J. & Colliot, O., 1 Jan 2017, In : Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 10555 LNCS, p. 13-22 10 p.

    Research output: Contribution to journalConference paper

  14. On pattern selection for laparoscope calibration

    Thompson, S., Meurer, Y., Edwards, E., Ramalhinho, J., Robu, M. R., Stoyanov, D., Ourselin, S., Davidson, B., Hawkes, D. & Clarkson, M. J., 1 Jan 2017, In : PROCEEDINGS- SPIE THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING. 10135

    Research output: Contribution to journalConference paper

  15. On the compactness, efficiency, and representation of 3D convolutional networks: Brain parcellation as a pretext task

    Li, W., Wang, G., Fidon, L., Ourselin, S., Cardoso, M. J. & Vercauteren, T., 1 Jan 2017, Information Processing in Medical Imaging - 25th International Conference, IPMI 2017, Proceedings. Springer Verlag, Vol. 10265 LNCS. p. 348-360 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10265 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  16. Secure multivariate large-scale multi-centric analysis through on-line learning: An imaging genetics case study

    Lorenzi, M., Gutman, B., Thompson, P. M., Alexander, D. C., Ourselin, S. & Altmann, A., 1 Jan 2017, 12th International Symposium on Medical Information Processing and Analysis. SPIE, Vol. 10160. 1016016

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  17. Short acquisition time PET quantification using MRI-based pharmacokinetic parameter synthesis

    Scott, C. J., Jiao, J., Cardoso, M. J., Melbourne, A., De Vita, E., Thomas, D. L., Burgos, N., Markiewicz, P., Schott, J. M., Hutton, B. F. & Ourselin, S., 1 Jan 2017, In : Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 10434 LNCS, p. 737-744 8 p.

    Research output: Contribution to journalConference paper

  18. Ultrasonic needle tracking with a fibre-optic ultrasound transmitter for guidance of minimally invasive fetal surgery

    Xia, W., Noimark, S., Ourselin, S., West, S. J., Finlay, M. C., David, A. L. & Desjardins, A. E., 1 Jan 2017, In : Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 10434 LNCS, p. 637-645 9 p.

    Research output: Contribution to journalConference paper

  19. 82: First-trimester metabolomic prediction of gestational diabetes (GDM): 37th Annual Meeting of the Society for Maternal Fetal MedicineThe Pregnancy Meeting37th Annual Meeting of the Society for Maternal Fetal Medicine

    Bahado-Singh, R. O., Syngelaki, A., Mandal, R., Han, B., Accurti, V., Li, L., Wang, N., Tseng, C-L., Chelliah, A., Turkoglu, O., Kaur, S., Wishart, D. S. & Nicolaides, K. H., Jan 2017, In : American Journal of Obstetrics and Gynecology. 216, 1, Supplement, p. S58

    Research output: Contribution to journalPoster abstract

  20. Automated multiple trajectory planning algorithm for the placement of stereo-electroencephalography (SEEG) electrodes in epilepsy treatment

    Sparks, R., Zombori, G., Rodionov, R., Nowell, M., Vos, S. B., Zuluaga, M. A., Diehl, B., Wehner, T., Miserocchi, A., McEvoy, A. W., Duncan, J. S. & Ourselin, S., Jan 2017, In : International Journal of Computer Assisted Radiology and Surgery. 12, 1, p. 123-136 14 p.

    Research output: Contribution to journalArticle

  21. Direct Parametric Reconstruction with Joint Motion Estimation/Correction for Dynamic Brain PET Data

    Jiao, J., Bousse, A., Thielemans, K., Burgos, N., Weston, P. S. J., Schott, J. M., Atkinson, D., Arridge, S. R., Hutton, B. F., Markiewicz, P. & Ourselin, S., Jan 2017, In : IEEE Transactions on Medical Imaging. 36, 1, p. 203-213 11 p., 7551132.

    Research output: Contribution to journalArticle

  22. The importance of correcting for signal drift in diffusion MRI

    Vos, S. B., Tax, C. M. W., Luijten, P. R., Ourselin, S., Leemans, A. & Froeling, M., Jan 2017, In : Magnetic Resonance in Medicine. 77, 1, p. 285-299 15 p.

    Research output: Contribution to journalArticle

  23. ASPRE trial: effect of aspirin in prevention of preterm preeclampsia in subgroups of women according to their characteristics and medical and obstetrical history

    Poon, L. C., Wright, D., Rolnik, D. L., Syngelaki, A., Delgado, J. L., Tsokaki, T., Leipold, G., Akolekar, R., Shearing, S., de Stefani, L., Jani, J. C., Plasencia, W., Evangelinakis, N., Gonzalez-Vanegas, O., Persico, N. & Nicolaides, K. H., 2017, In : American Journal of Obstetrics and Gynecology.

    Research output: Contribution to journalArticle

  24. ASPRE trial: performance of screening for preterm preeclampsia

    Rolnik, D., Wright, D., Poon, C. Y. L., Syngelaki, A., O'Gorman, N. M., De Paco, C., Akolekar, R., Cicero, S., Janga, D., Singh, M., Molina, F., Persico, N., Jani, J., Plasencia, W., Papaioannou, G. I., Tennebaum Gavish, K. & Nicolaides, K. H., 2017, In : Ultrasound in Obstetrics and Gynecology.

    Research output: Contribution to journalArticle

  25. Accuracy of competing risks model in screening for pre-eclampsia by maternal factors and biomarkers at 11-13 weeks' gestation

    O'Gorman, N. M., Wright, D., Poon, C. Y. L., Rolnik, D., Syngelaki, A., Wright, A., Akolekar, R., Cicero, S., Janga, D., Jani, J., Molina, F., De Paco, C., Papantoniou, N., Persico, N., Plasencia, W., Singh, M. & Nicolaides, K. H., 2017, In : Ultrasound in Obstetrics and Gynecology.

    Research output: Contribution to journalArticle

  26. Aspirin versus Placebo in Pregnancies at High Risk of Preterm Preeclampsia

    Rolnik, D., Wright, D., Poon, C. Y. L., O'Gorman, N. M., Syngelaki, A., De Paco, C., Akolekar, R., Cicero, S., Janga, D., Singh, M., Molina, F., Persico, N., Jani, J., Plasencia, W., Papaioannou, G. I., Tennebaum Gavish, K., Meiri, H., Gizurarson, S., Maclagan, K. & Nicolaides, K. H., 2017, In : New England Journal of Medicine.

    Research output: Contribution to journalArticle

  27. Development and characterisation of a brain tumour mimicking protoporphyrin IX fluorescence phantom (Conference Presentation)

    Xie, Y., Tisca, C., Peveler, W., Noimark, S., Desjardins, A. E., Parkin, I. P., Ourselin, S. & Vercauteren, T., 2017, Proc. SPIE 10049, Molecular-Guided Surgery: Molecules, Devices, and Applications III. Vol. 10049. (Proceedings of SPIE).

    Research output: Chapter in Book/Report/Conference proceedingMeeting abstract

  28. Estimation of an image derived input function with MR-defined carotid arteries in FDG-PET human studies using a novel partial volume correction method

    Sari, H., Erlandsson, K., Law, I., Larsson, H. B. W., Ourselin, S., Arridge, S., Atkinson, D. & Hutton, B. F., 2017, In : Journal of Cerebral Blood Flow and Metabolism. 37, 4, p. 1398-1409 12 p.

    Research output: Contribution to journalArticle

  29. Multicenter screening for preeclampsia by maternal factors and biomarkers at 11-13 weeks’ gestation: comparison to NICE guidelines and ACOG recommendations

    O'Gorman, N. M., Wright, D., Poon, C. Y. L., Rolnik, D., Syngelaki, A., de Alvarado, M., Carbone, I. F., Dutemeyer, V., Fiolna, M., Frick, A., Karagiotis, N., Mastrodima, S., De Paco, C., Papaioannou, G. I., Pazos, A., Plasencia, W. & Nicolaides, K. H., 2017, In : Ultrasound in Obstetrics and Gynecology.

    Research output: Contribution to journalArticle

  30. Predicting the risk to develop preeclampsia in the first trimester combining promoter variant-98A/C of LGALS13 (placental protein 13), black ethnicity, previous preeclampsia, obesity and maternal age

    Poon, C. Y. L., Madar-Shapiro, L., Karady, I., Trahtenherts, A., Syngelaki, A., Akolekar, R., Cohen, R., Sharabi-Nov, A., Huppertz, B., Sammar, M., Juhasz, K., Than, NG., Papp, Z., Romero, R., Nicolaides, K. H. & Meiri, H., 2017, In : Fetal Diagnosis and Therapy.

    Research output: Contribution to journalArticle

  31. Progressive callosal atrophy with stable memory impairment in familial British dementia

    Lane, C. A., Malone, I. B., Sudre, C. H., Ahsan, R. L., Manning, E., Harper, L., Ourselin, S., Cardoso, M. J. & Schott, J. M., 2017, Alzheimer's and Dementia. p. P465-P467 (Alzheimer's and Dementia; vol. 13 (7)).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  32. Scalable multimodal convolutional networks for brain tumour segmentation

    Fidon, L., Li, W., Garcia-Peraza-Herrera, L. C., Ekanayake, J., Kitchen, N., Ourselin, S. & Vercauteren, T., 2017, Medical Image Computing and Computer Assisted Intervention − MICCAI 2017 - 20th International Conference, Proceedings. Springer Verlag, Vol. 10435 . p. 285-293 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10435 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  33. Selection bias in the reported performances of AD classification pipelines

    Mendelson, A. F., Zuluaga, M. A., Lorenzi, M., Hutton, B. F. & Ourselin, S., 2017, In : NeuroImage: Clinical. 14, p. 400-416 17 p.

    Research output: Contribution to journalArticle

  34. Three-dimensional printed ultrasound and photoacoustic training phantoms for vasculature access

    Nikitichev, D. I., Xia, W., West, S. J., Desjardins, A. E., Ourselin, S. & Vercauteren, T., 2017, Proc. SPIE 10064, Photons Plus Ultrasound: Imaging and Sensing 2017. Vol. 10064. (Proceedings of SPIE).

    Research output: Chapter in Book/Report/Conference proceedingMeeting abstract

  35. White matter hyperintensities are seen only in GRN mutation carriers in the GENFI cohort

    Sudre, C. H., Bocchetta, M., Cash, D., Thomas, D. L., Woollacott, I., Dick, K. M., van Swieten, J., Borroni, B., Galimberti, D., Masellis, M., Tartaglia, M. C., Rowe, J. B., Graff, C., Tagliavini, F., Frisoni, G., Laforce, R., Finger, E., de Mendonça, A., Sorbi, S., Ourselin, S. & 3 others, Cardoso, M. J., Rohrer, J. D. & Genetic FTD Initiative, GENFI, 2017, In : NeuroImage: Clinical. 15, p. 171-180 10 p.

    Research output: Contribution to journalArticle

  36. Wide-field spectrally resolved quantitative fluorescence imaging system: toward neurosurgical guidance in glioma resection

    Xie, Y., Thom, M., Ebner, M., Wykes, V., Desjardins, A., Miserocchi, A., Ourselin, S., McEvoy, A. W. & Vercauteren, T., 2017, In : Journal of Biomedical Optics. 22, 11, p. 1-14 14 p., 116006.

    Research output: Contribution to journalArticle

  37. 2016
  38. A Combined EM and Visual Tracking Probabilistic Model for Robust Mosaicking: Application to Fetoscopy

    Tella, M., Daga, P., Chadebecq, F., Thompson, S., Shakir, D. I., Dwyer, G., Wimalasundera, R., Deprest, J., Stoyanov, D., Vercauteren, T. & Ourselin, S., 19 Dec 2016, Proceedings - 29th IEEE Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2016. IEEE Computer Society, p. 524-532 9 p. 7789562

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  39. Carbon-Nanotube–PDMS Composite Coatings on Optical Fibers for All-Optical Ultrasound Imaging

    Noimark, S., Colchester, R. J., Blackburn, B. J., Zhang, E. Z., Alles, E. J., Ourselin, S., Beard, P. C., Papakonstantinou, I., Parkin, I. P. & Desjardins, A. E., 13 Dec 2016, In : Advanced Functional Materials. 26, 46, p. 8390-8396 7 p.

    Research output: Contribution to journalArticle

  40. A Multicenter Cohort Study of Histologic Findings and Long-Term Outcomes of Kidney Disease in Women Who Have Been Pregnant

    Webster, P., Webster, L. M., Cook, H. T., Horsfield, C., Seed, P. T., Vaz, R., Santos, C., Lydon, I., Homsy, M., Lightstone, L. & Bramham, K., 9 Dec 2016, In : Clinical journal of the American Society of Nephrology : CJASN.

    Research output: Contribution to journalArticle

  41. Early Antenatal Prediction of Gestational Diabetes in Obese Women: Development of Prediction Tools for Targeted Intervention

    White, S. L., Lawlor, D. A., Briley, A. L., Godfrey, K. M., Nelson, S. M., Oteng-Ntim, E., Robson, S. C., Sattar, N., Seed, P. T., Costa Vieira, M., Welsh, P., Whitworth, M., Poston, L., Pasupathy, D. & UPBEAT Consortium, 8 Dec 2016, In : PLoS ONE. 11, 12, 17 p., e0167846.

    Research output: Contribution to journalArticle

  42. Macroprolactinomas and Nonfunctioning Pituitary Adenomas and Pregnancy Outcomes

    Lambert, K., Rees, K., Seed, P. T., Dhanjal, M. K., Knight, M., McCance, D. R. & Williamson, C., 2 Dec 2016, In : Obstetrics and Gynecology. 10 p.

    Research output: Contribution to journalArticle

  43. Slic-Seg: A minimally interactive segmentation of the placenta from sparse and motion-corrupted fetal MRI in multiple views

    Wang, G., Zuluaga, M. A., Pratt, R., Aertsen, M., Doel, T., Klusmann, M., David, A. L., Deprest, J., Vercauteren, T. & Ourselin, S., 1 Dec 2016, In : Medical Image Analysis. 34, p. 137-147 11 p.

    Research output: Contribution to journalArticle

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