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Research Outputs

  1. 2016
  2. PADUA and R.E.N.A.L. nephrometry scores correlate with perioperative outcomes of robot-assisted partial nephrectomy: analysis of the Vattikuti Global Quality Initiative in Robotic Urologic Surgery (GQI-RUS) database

    Schiavina, R., Novara, G., Borghesi, M., Ficarra, V., Ahlawat, R., Moon, D. A., Porpiglia, F., Challacombe, B. J., Dasgupta, P., Brunocilla, E., La Manna, G., Volpe, A., Verma, H., Martorana, G. & Mottrie, A., 11 Sep 2016, In : BJU International.

    Research output: Contribution to journalArticle

  3. 2013
  4. TEXTvre: Textual scholarship and the institutional ecosystem

    Hedges, M., Blanke, T. & Illingworth, M., 2013, Digital Ecosystems and Technologies (DEST), 2013 7th IEEE International Conference on. p. 66-71 6 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  5. 2012
  6. Sheer curation for experimental data and provenance

    Hedges, M. & Blanke, T., 2012, JCDL '12 Proceedings of the 12th ACM/IEEE-CS joint conference on Digital Libraries. ACM, p. 405-406 2 p.

    Research output: Chapter in Book/Report/Conference proceedingPoster abstract

  7. 2011
  8. Preparing DARIAH

    Blanke, T., Bryant, M., Hedges, M., Aschenbrenner, A. & Priddy, M., 2011, IEEE 7th International Conference on E-Science (e-Science), 2011 . IEEE, p. 158-165 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  9. Specificity aboutness in XML retrieval

    Blanke, T. & Lalmas, M., 2011, In : INFORMATION RETRIEVAL. 14, 1, p. 68-88 21 p.

    Research output: Contribution to journalArticle

  10. 2010
  11. RECOMB Comparative Genomics 2009: Preface

    I, M. & Ciccarelli, F., Sep 2010, In : Journal of Computational Biology. 17, 9, p. 1095-1096 2 p., N/A.

    Research output: Contribution to journalArticle

  12. Structural Analysis of the RZZ Complex Reveals Common Ancestry with Multisubunit Vesicle Tethering Machinery

    Civril, F., Wehenkel, A., Giorgi, F. M., Santaguida, S., Di Fonzo, A., Grigorean, G., Ciccarelli, F. D. & Musacchio, A., 12 May 2010, In : Structure. 18, 5, p. 616-626 11 p., N/A.

    Research output: Contribution to journalArticle

  13. Global repression of cancer gene expression in a zebrafish model of melanoma is linked to epigenetic regulation.

    Anelli, V., Santoriello, C., Distel, M., Köster, R. W., Ciccarelli, F. D. & Mione, M., 4 Jan 2010, In : Zebrafish. 6, 4, p. 417-424 8 p., N/A.

    Research output: Contribution to journalArticle

  14. 2009
  15. FancyGene: dynamic visualization of gene structures and protein domain architectures on genomic loci

    Rambaldi, D. & Ciccarelli, F. D., 1 Sep 2009, In : BIOINFORMATICS. 25, 17, p. 2281-2282 2 p., N/A.

    Research output: Contribution to journalArticle

  16. 2008
  17. Grass-roots Research in Arts and Humanities e-Science in the UK

    Blanke, T., Hedges, M. & Dunn, S., 2008, Proceedings of eResearch Australasia 2008.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  18. No claims for universal solutions-possible lessons from current e-humanities practices in germany and the uk

    Blanke, T., Aschenbrenner, A., Küster, M. & Ludwig, C., 2008, IEEE ESCIENCE'08: Proceedings of the IEEE e-Humanities Workshop.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  19. Providing linked-up access to Cultural Heritage Data

    Blanke, T. & Hedges, M., 2008, Information access to cultural heritage. Larson, M. (ed.).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  20. 2007
  21. Management and preservation of research data with iRODS

    Hedges, M., Hasan, A. & Blanke, T., 2007, CIMS '07 Proceedings of the ACM first workshop on CyberInfrastructure: information management in eScience. p. 17-22 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  22. e-Research infrastructure development and community engagement

    Voss, A., Mascord, M., Fraser, M., Jirotka, M., Procter, R., Halfpenny, P., Fergusson, D., Atkinson, M., Dunn, S. & Blanke, T., 2007, Proceedings of the UK e-Science All-Hands Meeting 2007.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  23. 2006
  24. The arts and humanities e-Science initiative in the UK

    Blanke, T. & Dunn, S., 2006, e-Science and Grid Computing, 2006. e-Science '06. Second IEEE International Conference on. IEEE

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  25. Theoretical benchmarks of XML retrieval

    Blanke, T. & Lalmas, M., 2006, SIGIR '06 Proceedings of the 29th annual international ACM SIGIR conference on Research and development in information retrieval. Vol. 2006. p. 613-614 2 p.

    Research output: Chapter in Book/Report/Conference proceedingPoster abstract

  26. 2005
  27. Complex genomic rearrangements lead to novel primate gene function

    Ciccarelli, F. D., von Mering, C., Suyama, M., Harrington, E. D., Izaurralde, E. & Bork, P., Mar 2005, In : Genome Research. 15, 3, p. 343-351 9 p., N/A.

    Research output: Contribution to journalArticle

  28. 2004
  29. Genome-wide analysis of mRNAs regulated by the THO complex in Drosophila melanogaster

    Rehwinkel, J., Herold, A., Gari, K., Kocher, T., Rode, M., Ciccarelli, F. L., Wilm, M. & Izaurralde, E., Jun 2004, In : NATURE STRUCTURAL AND MOLECULAR BIOLOGY. 11, 6, p. 558-566 9 p., N/A.

    Research output: Contribution to journalArticle

  30. 2003
  31. Nonsense-mediated mRNA decay in Drosophila: at the intersection of the yeast and mammalian pathways

    Gatfield, D., Unterholzner, L., Ciccarelli, F. D., Bork, P. & Izaurralde, E., 1 Aug 2003, In : The EMBO journal. 22, 15, p. 3960-3970 11 p., N/A.

    Research output: Contribution to journalArticle

  32. A protocol for the update of references to scientific literature in biological databases

    Perez-Iratxeta, C., Astola, N., Ciccarelli, F. D., Sha, P. K., Bork, P. & Andrade, M. A., 2003, In : Appl Bioinformatics. 2, 3, p. 189-191 3 p., N/A.

    Research output: Contribution to journalArticle

  33. 2002
  34. NEAT: a domain duplicated in genes near the components of a putative Fe3+ siderophore transporter from Gram-positive pathogenic bacteria

    Andrade, M. A., Ciccarelli, F. D., Perez-Iratxeta, C. & Bork, P., 15 Aug 2002, In : GENOME BIOLOGY. 3, 9, p. N/A 5 p., RESEARCH0047.

    Research output: Contribution to journalArticle

  35. SPG20 is mutated in Troyer syndrome, an hereditary spastic paraplegia

    Patel, H., Cross, H., Proukakis, C., Hershberger, R., Bork, P., Ciccarelli, F. D., Patton, M. A., McKusick, V. A. & Crosby, A. H., Aug 2002, In : Nature Genetics. 31, 4, p. 347-348 2 p., N/A.

    Research output: Contribution to journalArticle

  36. CASH--a beta-helix domain widespread among carbohydrate-binding proteins

    Ciccarelli, F. D., Copley, R. R., Doerks, T., Russell, R. B. & Bork, P., 1 Feb 2002, In : TRENDS IN BIOCHEMICAL SCIENCES. 27, 2, p. 59-62 4 p., N/A.

    Research output: Contribution to journalArticle

  37. 2000
  38. Large and diverse numbers of human diseases with HIKE mutations

    Ciccarelli, F. D., Acciarito, A. & Alberti, S., 1 Mar 2000, In : Human Molecular Genetics. 9, 6, p. 1001-1007 7 p., N/A.

    Research output: Contribution to journalArticle

  39. 1996
  40. Interictal polymorphic slow activity in temporal lobe epilepsy is associated with lateral temporal neocortex hypometabolism

    Koutroumanidis, M., Barrington, S., Agathonikou, A., Seed, P., Adachi, N., Elwes, R., Binnie, C. D., Polkey, C. E., Maisery, M. N., Wolfe, C. & Panayiotopoulos, C. P., 1996, In : Epilepsia. 37, p. 199 1 p.

    Research output: Contribution to journalArticle

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