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Research Outputs

  1. 2019
  2. Learning task-specific and shared representations in medical imaging

    Bragman, F. J. S., Tanno, R., Ourselin, S., Alexander, D. C. & Cardoso, M. J., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). SPRINGER, p. 374-383 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11767 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  3. MAVRIC: A Multicentre Randomised Controlled Trial of Transabdominal Versus Transvaginal Cervical Cerclage

    Shennan, A., Chandiramani, M., Bennett, P., David, A. L., Girling, J., Ridout, A., Seed, P. T., Simpson, N., Thornton, S., Tydeman, G., Quenby, S. & Carter, J., 2019, In : American Journal of Obstetrics and Gynecology.

    Research output: Contribution to journalArticle

  4. Publisher Correction: Early neuropathological and neurobehavioral consequences of preterm birth in a rabbit model (Scientific Reports, (2019), 9, 1, (3506), 10.1038/s41598-019-39922-8)

    van der Merwe, J., van der Veeken, L., Ferraris, S., Gsell, W., Himmelreich, U., Toelen, J., Ourselin, S., Melbourne, A., Vercauteren, T. & Deprest, J., 2019, In : Scientific Reports. 9, 1, 17005.

    Research output: Contribution to journalComment/debate

  5. Soft optically-tuneable fluorescence phantoms based on gel wax and quantum dots: a tissue surrogate for fluorescence imaging validation

    Xie, Y., Maneas, E., Islam, S., Peveler, W., Shapey, J., Xia, W., Ourselin, S., Parkin, I. P., Desjardins, A. E. & Vercauteren, T., 2019, (Proceedings of SPIE)

    Research output: Book/ReportBook

  6. 2018
  7. Rationale & design of the PROMISES study: A prospective assessment and validation study of salivary progesterone as a test for preterm birth in pregnant women from rural India

    Sharma, P., Khan, S., Ghule, M., Shivkumar, V. B., Dargan, R., Seed, P. T., Sarkar, A., Mehra, S., Shivkumar, P. V. & Tribe, R. M., 22 Dec 2018, In : Reproductive Health. 15, 1, 215.

    Research output: Contribution to journalArticle

  8. Spatiotemporal analysis for detection of pre-symptomatic shape changes in neurodegenerative diseases: Initial application to the GENFI cohort

    Genetic FTD Initiative, GENFI, 6 Dec 2018, In : NeuroImage. 188, p. 282-290 9 p.

    Research output: Contribution to journalArticle

  9. Optimizing Trajectories for Cranial Laser Interstitial Thermal Therapy Using Computer-Assisted Planning: A Machine Learning Approach

    Li, K., Vakharia, V. N., Sparks, R., França, L. G. S., Granados, A., McEvoy, A. W., Miserocchi, A., Wang, M., Ourselin, S. & Duncan, J. S., 5 Dec 2018, In : Neurotherapeutics. 16, 1, p. 182-1891

    Research output: Contribution to journalReview article

  10. Uncovering the heterogeneity and temporal complexity of neurodegenerative diseases with Subtype and Stage Inference

    The Genetic FTD Initiative (GENFI) & The Alzheimer’s Disease Neuroimaging Initiative (ADNI), 1 Dec 2018, In : Nature Communications. 9, 1, 4273.

    Research output: Contribution to journalArticle

  11. Joint registration and synthesis using a probabilistic model for alignment of MRI and histological sections

    Iglesias, J. E., Modat, M., Peter, L., Stevens, A., Annunziata, R., Vercauteren, T., Lein, E., Fischl, B. & Ourselin, S., Dec 2018, In : Medical Image Analysis. 50, p. 127-144

    Research output: Contribution to journalArticle

  12. Clinical phenotype, atrophy, and small vessel disease in ε2 carriers with Alzheimer disease

    Groot, C., Sudre, C. H., Barkhof, F., Teunissen, C. E., van Berckel, B. N. M., Seo, S. W., Ourselin, S., Scheltens, P., Cardoso, M. J., van der Flier, W. M. & Ossenkoppele, R., 13 Nov 2018, In : Neurology. 91, 20, p. e1851-e1859

    Research output: Contribution to journalArticle

  13. Cardiovascular risk factors and white matter hyperintensities: Difference in susceptibility in South Asians compared to Europeans

    Sudre, C. H., Smith, L., Atkinson, D., Chaturvedi, N., Ourselin, S., Barkhof, F., Hughes, A. D., Cardoso, M. J. & Jäger, R. H., 6 Nov 2018, In : Journal of the American Heart Association. 7, 21, e010533.

    Research output: Contribution to journalArticle

  14. INFLUENCES OF BLOOD PRESSURE AND BLOOD PRESSURE TRAJECTORIES ON CEREBRAL PATHOLOGY AT AGE 70: RESULTS FROM A BRITISH BIRTH COHORT

    Lane, C. A., Sudre, C. H., Barnes, J., Nicholas, J. M., Hardy, R., Parker, T. D., Murray-Smith, H., Keshavan, A., Cash, D. M., Malone, I. B., Wong, A., Kuh, D., Ourselin, S., Cardoso, M. J., Fox, N. C., Richards, M. & Schott, J. M., 22 Oct 2018, In : Alzheimer's & Dementia. 14, 7, p. P626-P627

    Research output: Contribution to journalArticle

  15. PATTERNS OF GLUCOSE HYPOMETABOLISM, SUBCORTICAL ATROPHY AND WHITE MATTER HYPERINTENSITIES IN THE BEHAVIORAL VARIANT OF ALZHEIMER’S DISEASE

    Singleton, E. H., Pijnenburg, Y. A. L., Sudre, C. H., Kochova, E., Groot, C., Papma, J. M., Ourselin, S., van Swieten, J. C., Barkhof, F., Cardoso, M. J., Scheltens, P., Rabinovici, G. D. & Ossenkoppele, R., 22 Oct 2018, In : Alzheimer's & Dementia. 14, 7, p. P94-P95

    Research output: Contribution to journalArticle

  16. The impact of ethnicity on adverse perinatal outcome in women with chronic hypertension: a cohort study

    Webster, L. M., Bramham, K., Seed, P. T., Homsy, M., Widdows, K., Webb, A. J., Nelson-Piercy, C., Magee, L., Thilaganathan, B., Myers, J. E. & Chappell, L. C., 14 Oct 2018, In : Ultrasound in Obstetrics and Gynecology.

    Research output: Contribution to journalArticle

  17. Towards Modelling Multi-Arm Robots: Eccentric Arrangement of Concentric Tubes

    Mitros, Z., Khadem, M., Seneci, C., Ourselin, S., Da Cruz, L. & Bergeles, C., 9 Oct 2018, BIOROB 2018 - 7th IEEE International Conference on Biomedical Robotics and Biomechatronics. IEEE Computer Society, Vol. 2018-August. p. 43-48 6 p. 8488091

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  18. PADDIT: Probabilistic Augmentation of Data using Diffeomorphic Image Transformation

    Arteaga, M. O., Sørensen, L., Cardoso, J., Modat, M., Ourselin, S., Sommer, S., Nielsen, M., Igel, C. & Pai, A., 3 Oct 2018, ( arXiv).

    Research output: Working paperPre-print

  19. From a Disposable Ureteroscope to an Active Lightweight Fetoscope-Characterization and Usability Evaluation

    Legrand, J., Ourak, M., Javaux, A., Gruijthuijsen, C., Ahmad, M. A., Van Cleynenbreugel, B., Vercauteren, T., Deprest, J., Ourselin, S. & Vander Poorten, E., Oct 2018, In : IEEE Robotics and Automation Letters. 3, 4, p. 4359-4366

    Research output: Contribution to journalArticle

  20. Weakly-supervised convolutional neural networks for multimodal image registration

    Hu, Y., Modat, M., Gibson, E., Li, W., Ghavami, N., Bonmati, E., Wang, G., Bandula, S., Moore, C. M., Emberton, M., Ourselin, S., Noble, J. A., Barratt, D. C. & Vercauteren, T., Oct 2018, In : Medical Image Analysis. 49, p. 1-13

    Research output: Contribution to journalArticle

  21. Elastic Registration of Geodesic Vascular Graphs

    Moriconi, S., Zuluaga, M. A., Jager, H. R., Nachev, P., Ourselin, S. & Cardoso, M. J., 26 Sep 2018, In : Medical Image Computing and Computer Assisted Intervention -- MICCAI. p. 810-818

    Research output: Contribution to journalArticle

  22. Deep boosted regression for mr to ct synthesis

    Kläser, K., Markiewicz, P., Ranzini, M., Li, W., Modat, M., Hutton, B. F., Atkinson, D., Thielemans, K., Cardoso, M. J. & Ourselin, S., 12 Sep 2018, In : Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 11037, p. 61-70 10 p.

    Research output: Contribution to journalConference paper

  23. A Slow-Digesting, Low-Glycemic Load Nutritional Beverage Improves Glucose Tolerance in Obese Pregnant Women Without Gestational Diabetes

    Maitland, R., Patel, N., Barr, S., Sherry, C., Marriage, B., Seed, P., Fernandez, L. G., Pedrosa, J. M. L., Murphy, H., Rueda, R. & Poston, L., 11 Sep 2018, In : Diabetes Technology and Therapeutics. 20, 10, p. 672-680 9 p.

    Research output: Contribution to journalArticle

  24. Somatosensory function and pain in extremely preterm young adults from the UK EPICure cohort: sex-dependent differences and impact of neonatal surgery

    Walker, S. M., Melbourne, A., O'Reilly, H., Beckmann, J., Eaton-Rosen, Z., Ourselin, S. & Marlow, N., Sep 2018, In : British Journal of Anaesthesia. 121, 3, p. 623-635

    Research output: Contribution to journalArticle

  25. An adaptive sampling scheme to efficiently train fully convolutional networks for semantic segmentation

    Berger, L., Eoin, H., Cardoso, M. J. & Ourselin, S., 21 Aug 2018, Medical Image Understanding and Analysis - 22nd Conference, Proceedings. Springer Verlag, p. 277-286 10 p. (Communications in Computer and Information Science; vol. 894).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  26. Three-dimensional ultrasonic needle tip tracking with a fiber-optic ultrasound receiver

    Xia, W., West, S. J., Finlay, M. C., Pratt, R., Mathews, S., Mari, J. M., Ourselin, S., David, A. L. & Desjardins, A. E., 21 Aug 2018, In : Journal of Visualized Experiments. 2018, 138, e57207.

    Research output: Contribution to journalArticle

  27. Simultaneous synthesis of FLAIR and segmentation of white matter hypointensities from T1 MRIs

    Orbes-Arteaga, M., Cardoso, M. J., Sørensen, L., Modat, M., Ourselin, S., Nielsen, M. & Pai, A., 20 Aug 2018, In : arXiv.

    Research output: Contribution to journalArticle

  28. Fast adaptive optics scanning light ophthalmoscope retinal montaging

    Davidson, B., Kalitzeos, A., Carroll, J., Dubra, A., Ourselin, S., Michaelides, M. & Bergeles, C., 15 Aug 2018, In : Biomedical Optics Express. 9, 9, p. 4317-4328

    Research output: Contribution to journalArticle

  29. A mixed-reality surgical trainer with comprehensive sensing for fetal laser minimally invasive surgery

    Javaux, A., Bouget, D., Gruijthuijsen, C., Stoyanov, D., Vercauteren, T., Ourselin, S., Deprest, J., Denis, K. & Vander Poorten, E., 27 Jul 2018, In : International Journal of Computer Assisted Radiology and Surgery.

    Research output: Contribution to journalArticle

  30. Autoimmune liver disease serology in acute hepatitis E virus infection

    Terziroli Beretta-piccoli, B., Ripellino, P., Gobbi, C., Cerny, A., Baserga, A., Di Bartolomeo, C., Bihl, F., Deleonardi, G., Melidona, L., Grondona, A. G., Mieli-Vergani, G., Vergani, D. & Muratori, L., 7 Jul 2018, In : Journal of Autoimmunity.

    Research output: Contribution to journalArticle

  31. Non-invasive kinetic modelling of PET tracers with radiometabolites using a constrained simultaneous estimation method: evaluation with 11C-SB201745

    Sari, H., Erlandsson, K., Marner, L., Law, I., Larsson, H. B. W., Thielemans, K., Ourselin, S., Arridge, S., Atkinson, D. & Hutton, B. F., 3 Jul 2018, In : EJNMMI Research. 8, 58.

    Research output: Contribution to journalArticle

  32. Effects of carbamazepine and lamotrigine on functional magnetic resonance imaging cognitive networks

    Xiao, F., Caciagli, L., Wandschneider, B., Sander, J. W., Sidhu, M., Winston, G., Burdett, J., Trimmel, K., Hill, A., Vollmar, C., Vos, S. B., Ourselin, S., Thompson, P. J., Zhou, D., Duncan, J. S. & Koepp, M. J., 1 Jul 2018, In : Epilepsia. 59, 7, p. 1362-1371 10 p.

    Research output: Contribution to journalArticle

  33. Genetic study of multimodal imaging Alzheimer's disease progression score implicates novel loci

    Scelsi, M. A., Khan, R. R., Lorenzi, M., Christopher, L., Greicius, M. D., Schott, J. M., Ourselin, S. & Altmann, A., 1 Jul 2018, In : Brain. 141, 7, p. 2167-2180 14 p.

    Research output: Contribution to journalArticle

  34. Creating biobanks in low and middle-income countries to improve knowledge: The PREPARE initiative

    De Oliveira, L., Dias, M. A. B., Jeyabalan, A., Payne, B., Redman, C. W., Magee, L., Poston, L., Chappell, L., Seed, P., von Dadelszen, P. & Roberts, J. M., Jul 2018, In : Pregnancy Hypertension: An International Journal of Women's Cardiovascular Health. 13, p. 62-64 3 p.

    Research output: Contribution to journalArticle

  35. Gestational diabetes modifies the association between PlGF in early pregnancy and preeclampsia in women with obesity

    Vieira, M. C., Begum, S., Seed, P. T., Badran, D., Briley, A. L., Gill, C., Godfrey, K. M., Lawlor, D. A., Nelson, S. M., Patel, N., Sattar, N., White, S. L., Poston, L., Pasupathy, D. & UPBEAT Consortium, Jul 2018, In : Pregnancy Hypertension: An International Journal of Women's Cardiovascular Health. 13, p. 267-272

    Research output: Contribution to journalArticle

  36. Robot-assisted stereotactic brain biopsy: systematic review and bibliometric analysis

    Marcus, H. J., Vakharia, V. N., Ourselin, S., Duncan, J., Tisdall, M. & Aquilina, K., Jul 2018, In : Child's Nervous System. 34, 7, p. 1299–1309 11 p.

    Research output: Contribution to journalArticle

  37. Towards computer-assisted TTTS: Laser ablation detection for workflow segmentation from fetoscopic video

    Vasconcelos, F., Brandão, P., Vercauteren, T., Ourselin, S., Deprest, J., Peebles, D. & Stoyanov, D., 27 Jun 2018, In : International Journal of Computer Assisted Radiology and Surgery. p. 1-10 10 p.

    Research output: Contribution to journalArticle

  38. Towards safe deep learning: accurately quantifying biomarker uncertainty in neural network predictions

    Eaton-Rosen, Z., Bragman, F., Bisdas, S., Ourselin, S. & Cardoso, M. J., 22 Jun 2018, In : arXiv.

    Research output: Contribution to journalArticle

  39. Hippocampal Subfield Volumetry: Differential Pattern of Atrophy in Different Forms of Genetic Frontotemporal Dementia

    Bocchetta, M., Iglesias, J. E., Scelsi, M. A., Cash, D. M., Cardoso, M. J., Modat, M., Altmann, A., Ourselin, S., Warren, J. D. & Rohrer, J. D., 19 Jun 2018, In : Journal of Alzheimer's Disease. 64, 2, p. 497-504 8 p.

    Research output: Contribution to journalArticle

  40. Uncertainty in multitask learning: joint representations for probabilistic MR-only radiotherapy planning

    Bragman, F. J. S., Tanno, R., Eaton-Rosen, Z., Li, W., Hawkes, D. J., Ourselin, S., Alexander, D. C., McClelland, J. R. & Cardoso, M. J., 18 Jun 2018, In : arXiv.

    Research output: Contribution to journalArticle

  41. DeepIGeoS: A Deep Interactive Geodesic Framework for Medical Image Segmentation

    Wang, G., Zuluaga, M. A., Li, W., Pratt, R., Patel, P. A., Aertsen, M., Doel, T., David, A. L., Deprest, J., Ourselin, S. & Vercauteren, T., 1 Jun 2018, In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 14 p.

    Research output: Contribution to journalArticle

  42. Model-Based Learning for Accelerated, Limited-View 3-D Photoacoustic Tomography

    Hauptmann, A., Lucka, F., Betcke, M., Huynh, N., Adler, J., Cox, B., Beard, P., Ourselin, S. & Arridge, S., 1 Jun 2018, In : IEEE Transactions on Medical Imaging. 37, 6, p. 1382-1393 12 p.

    Research output: Contribution to journalArticle

  43. Spinal cord atrophy as a primary outcome measure in phase II trials of progressive multiple sclerosis

    Cawley, N., Tur, C., Prados, F., Plantone, D., Kearney, H., Abdel-Aziz, K., Ourselin, S., Wheeler-Kingshott, C. A. M. G., Miller, D. H., Thompson, A. J. & Ciccarelli, O., 1 Jun 2018, In : Multiple Sclerosis Journal. 24, 7, p. 932-941 10 p.

    Research output: Contribution to journalArticle

  44. White matter hyperintensities and vascular risk factors in monozygotic twins

    ten Kate, M., Sudre, C. H., den Braber, A., Konijnenberg, E., Nivard, M. G., Cardoso, M. J., Scheltens, P., Ourselin, S., Boomsma, D. I., Barkhof, F. & Visser, P. J., 1 Jun 2018, In : Neurobiology of Aging. 66, p. 40-48 9 p.

    Research output: Contribution to journalArticle

  45. Automatic segmentation of stereoelectroencephalography (SEEG) electrodes post-implantation considering bending

    Granados, A., Vakharia, V., Rodionov, R., Schweiger, M., Vos, S. B., O’Keeffe, A. G., Li, K., Wu, C., Miserocchi, A., McEvoy, A. W., Clarkson, M. J., Duncan, J. S., Sparks, R. & Ourselin, S., Jun 2018, In : International Journal of Computer Assisted Radiology and Surgery. 13, 6, p. 935-946 12 p.

    Research output: Contribution to journalArticle

  46. DEEP LEARNING BASED CLASSIFICATION OF INTRAPAPILLARY CAPILLARY LOOPS FOR DETECTION OF EARLY OESOPHAGEAL SQUAMOUS NEOPLASIA

    Everson, M., Herrera, L. G. P., Li, W., Muntion, I. L., Ahmad, O., Graham, D., Banks, M., Lovat, L., Vercauteren, T., Ourselin, S., Wang, W. & Haidry, R., Jun 2018, In : Gut. 67, p. A10-A11

    Research output: Contribution to journalMeeting Abstract

  47. In vivo estimation of target registration errors during augmented reality laparoscopic surgery

    Thompson, S., Schneider, C., Bosi, M., Gurusamy, K., Ourselin, S., Davidson, B., Hawkes, D. & Clarkson, M. J., Jun 2018, In : International Journal of Computer Assisted Radiology and Surgery. 13, 6, p. 865-874 10 p.

    Research output: Contribution to journalArticle

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