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Research Outputs

  1. 2019
  2. Computer-Assisted Planning for Stereoelectroencephalography (SEEG)

    Vakharia, V. N., Sparks, R., Miserocchi, A., Vos, S. B., O’Keeffe, A., Rodionov, R., McEvoy, A. W., Ourselin, S. & Duncan, J. S., 1 Oct 2019, In : Neurotherapeutics. 16, 4, p. 1183-1197 15 p.

    Research output: Contribution to journalArticle

  3. Cortical cerebral blood flow in ageing: effects of haematocrit, sex, ethnicity and diabetes

    Smith, L. A., Melbourne, A., Owen, D., Cardoso, M. J., Sudre, C. H., Tillin, T., Sokolska, M., Atkinson, D., Chaturvedi, N., Ourselin, S., Hughes, A. D., Barkhof, F. & Jäger, H. R., 1 Oct 2019, In : European Radiology. 29, 10, p. 5549-5558 10 p.

    Research output: Contribution to journalArticle

  4. Relationships of maternal body mass index and plasma biomarkers with childhood body mass index and adiposity at 6 years: The Children of SCOPE study

    on behalf of SCOPE consortium, 1 Oct 2019, In : Pediatric Obesity. 14, 10, 12 p., e12537.

    Research output: Contribution to journalArticle

  5. The Effect of Vascular Segmentation Methods on Stereotactic Trajectory Planning for Drug-Resistant Focal Epilepsy: A Retrospective Cohort Study

    Vakharia, V. N., Sparks, R., Vos, S. B., McEvoy, A. W., Miserocchi, A., Ourselin, S. & Duncan, J. S., 1 Oct 2019, In : World Neurosurgery: X. 4, 100057.

    Research output: Contribution to journalArticle

  6. Stochastic filter groups for multi-task cnns: Learning specialist and generalist convolution kernels

    Bragman, F., Tanno, R., Ourselin, S., Alexander, D. & Cardoso, J., Oct 2019, Proceedings - 2019 International Conference on Computer Vision, ICCV 2019. Institute of Electrical and Electronics Engineers Inc., p. 1385-1394 10 p. 9009037. (Proceedings of the IEEE International Conference on Computer Vision; vol. 2019-October).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  7. Handheld Active Add-On Control Unit for a Cable-Driven Flexible Endoscope

    Legrand, J., Javaux, A., Ourak, M., Wenmakers, D., Vercauteren, T., Deprest, J., Ourselin, S., Denis, K. & Vander Poorten, E., 20 Sep 2019, In : Front. Robot. AI. 6

    Research output: Contribution to journalArticle

  8. Intraoperative multispectral and hyperspectral label-free imaging: A systematic review of in vivo clinical studies

    Shapey, J., Xie, Y., Nabavi, E., Bradford, R., Saeed, S. R., Ourselin, S. & Vercauteren, T., 1 Sep 2019, In : Journal of biophotonics. 12, 9, p. e201800455 e201800455.

    Research output: Contribution to journalReview article

  9. Machine learning classifiers can predict Gleason pattern 4 prostate cancer with greater accuracy than experienced radiologists

    Antonelli, M., Johnston, E. W., Dikaios, N., Cheung, K. K., Sidhu, H. S., Appayya, M. B., Giganti, F., Simmons, L. A. M., Freeman, A., Allen, C., Ahmed, H. U., Atkinson, D., Ourselin, S. & Punwani, S., 1 Sep 2019, In : European Radiology. 29, 9, p. 4754-4764 11 p.

    Research output: Contribution to journalArticle

  10. Multicenter validation of automated trajectories for selective laser amygdalohippocampectomy

    Vakharia, V. N., Sparks, R. E., Li, K., O'Keeffe, A. G., Pérez-García, F., França, L. G. S., Ko, A. L., Wu, C., Aronson, J. P., Youngerman, B. E., Sharan, A., McKhann, G., Ourselin, S. & Duncan, J. S., 1 Sep 2019, In : Epilepsia. 60, 9, p. 1949-1959 11 p.

    Research output: Contribution to journalArticle

  11. Stereoelectroencephalography electrode placement: Detection of blood vessel conflicts

    Li, K., Vakharia, V. N., Sparks, R., Rodionov, R., Vos, S. B., McEvoy, A. W., Miserocchi, A., Wang, M., Ourselin, S. & Duncan, J. S., 1 Sep 2019, In : Epilepsia. 60, 9, p. 1942-1948 7 p.

    Research output: Contribution to journalArticle

  12. The quantitative neuroradiology initiative framework: application to dementia

    Goodkin, O., Pemberton, H., Vos, S. B., Prados, F., Sudre, C. H., Moggridge, J., Cardoso, M. J., Ourselin, S., Bisdas, S., White, M., Yousry, T., Thornton, J. & Barkhof, F., Sep 2019, In : British Journal of Radiology. 92, 1101, p. 20190365 20190365.

    Research output: Contribution to journalReview article

  13. Multi-Domain Adaptation in Brain MRI through Paired Consistency and Adversarial Learning

    Orbes-Arteaga, M., Varsavsky, T., Sudre, C. H., Eaton-Rosen, Z., Haddow, L. J., Sørensen, L., Nielsen, M., Pai, A., Ourselin, S., Modat, M., Nachev, P. & Cardoso, M. J., 16 Aug 2019, In : DART 2019. p. 54-62 9 p.

    Research output: Contribution to journalArticle

  14. Pruning strategies for efficient online globally consistent mosaicking in fetoscopy

    Tella-Amo, M., Peter, L., Shakir, D. I., Deprest, J., Stoyanov, D., Vercauteren, T. & Ourselin, S., 7 Aug 2019, In : Journal of medical imaging (Bellingham, Wash.). 6, 3, p. 035001 035001.

    Research output: Contribution to journalArticle

  15. STRUCTURE-FUNCTION RELATIONSHIPS IN THE FETO-PLACENTAL CIRCULATION FROM IN SILICO INTERPRETATION OF MICRO-CT VASCULAR STRUCTURES

    Byrne, M., Aughwane, R., James, J., Hutchinson, C., Arthurs, O., Sebire, N., Ourselin, S., David, A., Melbourne, A. & Clark, A., Aug 2019, In : Placenta. 83, p. E84-E84

    Research output: Contribution to journalMeeting Abstract

  16. As easy as 1, 2... 4? Uncertainty in counting tasks for medical imaging

    Eaton-Rosen, Z., Varsavsky, T., Ourselin, S. & Cardoso, M. J., 25 Jul 2019, In : Medical Image Computing and Computer Assisted Intervention -- MICCAI. p. 356-364 9 p.

    Research output: Contribution to journalArticle

  17. Longitudinal neuroanatomical and cognitive progression of posterior cortical atrophy

    Firth, N. C., Primativo, S., Marinescu, R. V., Shakespeare, T. J., Suarez-Gonzalez, A., Lehmann, M., Carton, A., Ocal, D., Pavisic, I., Paterson, R. W., Slattery, C. F., Foulkes, A. J. M., Ridha, B. H., Gil-Néciga, E., Oxtoby, N. P., Young, A. L., Modat, M., Cardoso, M. J., Ourselin, S., Ryan, N. S. & 10 others, Miller, B. L., Rabinovici, G. D., Warrington, E. K., Rossor, M. N., Fox, N. C., Warren, J. D., Alexander, D. C., Schott, J. M., Yong, K. X. X. & Crutch, S. J., 1 Jul 2019, In : Brain. 142, 7, p. 2082-2095 14 p.

    Research output: Contribution to journalArticle

  18. Quantifying adherence to antihypertensive medication for chronic hypertension during pregnancy

    Webster, L. M., Reed, K., Myers, J. E., Burns, A., Gupta, P., Patel, P., Wiesender, C., Seed, P. T., Nelson-Piercy, C. & Chappell, L. C., 1 Jul 2019, In : Pregnancy Hypertension. 17, p. 12-14 3 p.

    Research output: Contribution to journalArticle

  19. The impacted foetal head at caesarean section: incidence and techniques used in a single UK institution

    Rice, A., Tydeman, G., Briley, A. & Seed, P. T., 19 Jun 2019, In : Journal of Obstetrics and Gynaecology. 39, 7, p. 948-951 4 p.

    Research output: Contribution to journalArticle

  20. Modeling longitudinal imaging biomarkers with parametric Bayesian multi-task learning

    for ADNI, 5 Jun 2019, In : Human Brain Mapping. 40, 13, p. 3982-4000 19 p.

    Research output: Contribution to journalArticle

  21. Diagnostic Indicators of Superimposed Preeclampsia in Women With CKD

    Wiles, K., Bramham, K., Seed, P. T., Kurlak, L. O., Mistry, H. D., Nelson-piercy, C., Lightstone, L. & Chappell, L. C., 1 Jun 2019, In : Kidney International Reports. 4, 6, p. 842-853 12 p.

    Research output: Contribution to journalArticle

  22. Applying causal models to explore the mechanism of action of simvastatin in progressive multiple sclerosis

    Eshaghi, A., Kievit, R. A., Prados, F., Sudre, C. H., Nicholas, J., Cardoso, M. J., Chan, D., Nicholas, R., Ourselin, S., Greenwood, J., Thompson, A. J., Alexander, D. C., Barkhof, F., Chataway, J. & Ciccarelli, O., 28 May 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 22, p. 11020-11027 8 p.

    Research output: Contribution to journalArticle

  23. Automated fiber tract reconstruction for surgery planning: Extensive validation in language-related white matter tracts

    Mancini, M., Vos, S. B., Vakharia, V. N., O'Keeffe, A. G., Trimmel, K., Barkhof, F., Dorfer, C., Soman, S., Winston, G. P., Wu, C., Duncan, J. S., Sparks, R. & Ourselin, S., 28 May 2019, In : NeuroImage: Clinical. 23, 9 p., 101883.

    Research output: Contribution to journalArticle

  24. POPPIE: Protocol for a randomised controlled pilot trial of continuity of midwifery care for women at increased risk of preterm birth

    Fernandez Turienzo, C., Bick, D., Bollard, M., Brigante, L., Briley, A., Coxon, K., Cross, P., Healey, A., Mehta, M., Melaugh, A., Moulla, J., Seed, P. T., Shennan, A. H., Singh, C., Tribe, R. M. & Sandall, J., 14 May 2019, In : Trials. 20, 1, 271.

    Research output: Contribution to journalArticle

  25. A multi-shell multi-tissue diffusion study of brain connectivity in early multiple sclerosis

    Tur, C., Grussu, F., Prados, F., Charalambous, T., Collorone, S., Kanber, B., Cawley, N., Altmann, D. R., Ourselin, S., Barkhof, F., Clayden, J. D., Toosy, A. T., Wheeler-Kingshott, C. AM. G. & Ciccarelli, O., 10 May 2019, In : Multiple Sclerosis Journal. p. 1-12 12 p.

    Research output: Contribution to journalArticle

  26. Segmentation of medial temporal subregions reveals early right-sided involvement in semantic variant PPA

    Bocchetta, M., Iglesias, J. E., Russell, L. L., Greaves, C. V., Marshall, C. R., Scelsi, M. A., Cash, D. M., Ourselin, S., Warren, J. D. & Rohrer, J. D., 10 May 2019, In : Alzheimer's research & therapy. 11, 1, p. 1-9 41.

    Research output: Contribution to journalArticle

  27. Placental growth factor testing to assess women with suspected pre-eclampsia: a multicentre, pragmatic, stepped-wedge cluster-randomised controlled trial

    Duhig, K. E., Myers, J., Seed, P. T., Sparkes, J., Lowe, J., Hunter, R. M., Shennan, A. H., Chappell, L. C., Bahl, R., Bambridge, G., Barnfield, S., Ficquet, J., Gill, C., Girling, J., Harding, K., Khalil, A., Sharp, A., Simpson, N. & Tuffnell, D., 4 May 2019, In : The Lancet. 393, 10183, p. 1807-1818 12 p.

    Research output: Contribution to journalArticle

  28. Evaluation of Haptic Feedback on Bimanually Teleoperated Laparoscopy for Endometriosis Surgery

    Portoles Diez, S. J., Borghesan, G., Joyeux, L., Meuleman, C., Deprest, J., Stoyanov, D., Ourselin, S., Vercauteren, T., Reynaerts, D. & Vander Poorten, E., 1 May 2019, In : IEEE Transactions on Biomedical Engineering. 66, 5, p. 1207-1221 15 p., 8469020.

    Research output: Contribution to journalArticle

  29. Robotic control of a multi-modal rigid endoscope combining optical imaging with all-optical ultrasound

    Dwyer, G., Colchester, R. J., Alles, E. J., Maneas, E., Ourselin, S., Vercauteren, T., Deprest, J., Poorten, E. V., Coppi, P. D., Desjardins, A. E. & Stoyanov, D., 1 May 2019, 2019 International Conference on Robotics and Automation, ICRA 2019. Institute of Electrical and Electronics Engineers Inc., Vol. 2019-May. p. 3882-3888 7 p. 8794289

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  30. Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks

    Wang, G., Li, W., Aertsen, M., Deprest, J., Ourselin, S. & Vercauteren, T., 21 Apr 2019, In : NEUROCOMPUTING. 338, p. 34-45 12 p.

    Research output: Contribution to journalArticle

  31. Exploring the effect of implementation and context on a stepped-wedge randomised controlled trial of a vital sign triage device in routine maternity care in low-resource settings

    Vousden, N., Lawley, E., Seed, P. T., Gidiri, M. F., Charantimath, U., Makonyola, G., Brown, A., Yadeta, L., Best, R., Chinkoyo, S., Vwalika, B., Nakimuli, A., Ditai, J., Greene, G., Chappell, L. C., Sandall, J., Shennan, A. H., Bukani, D., Toussaint, P., Vixama, A. & 30 others, Hill, C., Nakirijja, E., Birungi, D., Kalyowa, N., Namakuli, D., Byamugisha, J., Odeke, N. M., Wandabwa, J., Momodou, F., Sesay, M., Sandi, P., Conteh, J., Kamara, J., Clarke, M., Miti, J., Chima, M., Kopeka, M., Jere, C., Musonda, T., Mambo, V., Guchale, Y., Surur, F., Mungarwadi, G. M., Mastiholi, S. S., Karadiguddi, C. C., Hezelgrave, N., Duhig, K. E., Kachinjika, M., Bellad, M. & Makwakwa, J., 18 Apr 2019, In : Implementation Science. 14, 1, 38.

    Research output: Contribution to journalArticle

  32. A framework for memory performance prediction from brain volume in preterm-born adolescents

    Irzan, H., O'Reilly, H., Ourselin, S., Marlow, N. & Melbourne, A., 1 Apr 2019, In : International Symposium on Biomedical Imaging (ISBI). 2019-April, p. 400-403 4 p.

    Research output: Contribution to journalArticle

  33. Cerebellar, limbic, and midbrain volume alterations in sudden unexpected death in epilepsy

    Allen, L. A., Vos, S. B., Kumar, R., Ogren, J. A., Harper, R. K., Winston, G. P., Balestrini, S., Wandschneider, B., Scott, C. A., Ourselin, S., Duncan, J. S., Lhatoo, S. D., Harper, R. M. & Diehl, B., 1 Apr 2019, In : Epilepsia. 60, 4, p. 718-729 12 p.

    Research output: Contribution to journalArticle

  34. Interactive virtual 3D models of renal cancer patient anatomies alter partial nephrectomy surgical planning decisions and increase surgeon confidence compared to volume-rendered images

    Hyde, E. R., Berger, L. U., Ramachandran, N., Hughes-Hallett, A., Pavithran, N. P., Tran, M. G. B., Ourselin, S., Bex, A. & Mumtaz, F. H., 1 Apr 2019, In : International Journal of Computer Assisted Radiology and Surgery. 14, 4, p. 723-732 10 p.

    Research output: Contribution to journalArticle

  35. Training recurrent neural networks robust to incomplete data: Application to Alzheimer's disease progression modeling

    for the Alzheimer's Disease Neuroimaging Initiative, Apr 2019, In : Medical Image Analysis. 53, p. 39-46 8 p.

    Research output: Contribution to journalArticle

  36. Incidence of eclampsia and related complications across 10 low- and middle-resource geographical regions: Secondary analysis of a cluster randomised controlled trial

    CRADLE Trial Collaborative Group, 29 Mar 2019, In : PLoS Medicine. 16, 3, 15 p., e1002775.

    Research output: Contribution to journalArticle

  37. Standardized Assessment of Automatic Segmentation of White Matter Hyperintensities and Results of the WMH Segmentation Challenge

    Kuijf, H. J., Biesbroek, J. M., De Bresser, J., Heinen, R., Andermatt, S., Bento, M., Berseth, M., Belyaev, M., Cardoso, M. J., Casamitjana, A., Collins, D. L., Dadar, M., Georgiou, A., Ghafoorian, M., Jin, D., Khademi, A., Knight, J., Li, H., Llado, X., Luna, M. & 24 others, Mahmood, Q., Mckinley, R., Mehrtash, A., Ourselin, S., Park, B., Park, H., Park, S. H., Pezold, S., Puybareau, E., Rittner, L., Sudre, C. H., Valverde, S., Vilaplana, V., Wiest, R., Xu, Y., Xu, Z., Zeng, G., Zhang, J., Zheng, G., Chen, C., Van Der Flier, W., Barkhof, F., Viergever, M. A. & Biessels, G. J., 19 Mar 2019, In : IEEE transactions on medical imaging. 38, 11, p. 2556-2568 13 p.

    Research output: Contribution to journalArticle

  38. PADDIT: Probabilistic Augmentation of Data using Diffeomorphic Image Transformation

    Orbes-Arteaga, M., Sørensen, L., Cardoso, J., Modat, M., Ourselin, S., Sommer, S., Nielsen, M., Igel, C. & Pai, A., 15 Mar 2019, Medical Imaging 2019: Image Processing. Angelini, E. D., Angelini, E. D., Angelini, E. D. & Landman, B. A. (eds.). SPIE, Vol. 10949. 109490S

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  39. Association of Piriform Cortex Resection With Surgical Outcomes in Patients With Temporal Lobe Epilepsy

    Galovic, M., Baudracco, I., Wright-Goff, E., Pillajo, G., Nachev, P., Wandschneider, B., Woermann, F., Thompson, P., Baxendale, S., McEvoy, A. W., Nowell, M., Mancini, M., Vos, S. B., Winston, G. P., Sparks, R., Prados, F., Miserocchi, A., de Tisi, J., Van Graan, L. A., Rodionov, R. & 13 others, Wu, C., Alizadeh, M., Kozlowski, L., Sharan, A. D., Kini, L. G., Davis, K. A., Litt, B., Ourselin, S., Moshé, S. L., Sander, J. W. A., Löscher, W., Duncan, J. S. & Koepp, M. J., 11 Mar 2019, In : JAMA Neurology. 76, 6, p. 690-700 11 p.

    Research output: Contribution to journalArticle

  40. Association of adverse perinatal outcomes of intrahepatic cholestasis of pregnancy with biochemical markers: results of aggregate and individual patient data meta-analyses

    Ovadia, C., Seed, P. T., Sklavounos, A., Geenes, V., Di Illio, C., Chambers, J., Kohari, K., Bacq, Y., Bozkurt, N., Brun-furrer, R., Bull, L., Estiú, M. C., Grymowicz, M., Gunaydin, B., Hague, W. M., Haslinger, C., Hu, Y., Kawakita, T., Kebapcilar, A. G., Kebapcilar, L. & 20 others, Kondrackienė, J., Koster, M. P. H., Kowalska-kańka, A., Kupčinskas, L., Lee, R. H., Locatelli, A., Macias, R. I. R., Marschall, H., Oudijk, M. A., Raz, Y., Rimon, E., Shan, D., Shao, Y., Tribe, R., Tripodi, V., Yayla Abide, C., Yenidede, I., Thornton, J. G., Chappell, L. C. & Williamson, C., 2 Mar 2019, In : The Lancet. 393, 10174, p. 899-909 11 p.

    Research output: Contribution to journalArticle

  41. Artificial intelligence for the real-time classification of intrapapillary capillary loop patterns in the endoscopic diagnosis of early oesophageal squamous cell carcinoma: A proof-of-concept study

    Everson, M., Garcia-Peraza-Herrera, L. C., Li, W., Luengo, I. M., Ahmad, O., Banks, M., Magee, C., Alzoubaidi, D., Hsu, H., Graham, D., Vercauteren, T., Lovat, L. B., Ourselin, S., Kashin, S., Wang, H., Wang, W. & Haidry, R., 1 Mar 2019, In : United European Gastroenterology Journal. 7, 2, p. 297-306 10 p.

    Research output: Contribution to journalArticle

  42. Quality of stepped-wedge trial reporting can be reliably assessed using an updated CONSORT: crowd-sourcing systematic review

    The SW-CRT Review Group, Hemming, K., Carroll, K., Thompson, J., Forbes, A., Taljaard, M., Dutton, S. J., Madurasinghe, V., Morgan, K., Stuart, B., Fielding, K., Cornelius, V., Turner, E. L., Hooper, R., Giraudeau, B., Seed, P. T., Nickless, A., Grayling, M., Prague, M., Kerry, S. & 31 others, Bell, L., Watson, E., Gafoor, R., Marlin, N., Yorganci, E., Smith, L., Mbekwe, M., Teerenstra, S., Chan, C., Moerbeek, M., Jacobsen, P., Bond, S., Jones, B., Preisser, J., Kanaan, M., Hewitt, C., Easter, C., Pellatt-Higgins, T., Pankhurst, L., Agbla, S. C., Eldridge, S., Lerner, R. G., Leyrat, C., Pilling, M., Forman, J. R., Bhattacharya, I., Magill, N., Candlish, J., McDowell, C., Martin, J. & Kristunas, C., 1 Mar 2019, In : Journal of Clinical Epidemiology. 107, p. 77-88 12 p.

    Research output: Contribution to journalReview article

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