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Research Outputs

  1. 2017
  2. Sharp, Andrew ; Chappell, Lucy ; Dekker, Gustaaf ; Pelletier, Sanja ; Garnier, Yves ; Zeren, Onur ; Hillerer, Katharina M. ; Fischer, Thorsten ; Seed, Paul ; Turner, Mark ; Shennan, Andrew ; Alfirevic, Zarko. / OP 2 Placental growth factor informed management of suspected pre-eclampsia and/or fetal growth restriction : The MAPPLE cohort study. In: Pregnancy Hypertension. 2017 ; Vol. 9. pp. 9-10.
  3. Ourselin, Sebastien ; Sabuncu, Mert R. ; Wells, William ; Joskowicz, Leo ; Unal, Gozde ; Maier, Andreas. / Guest editorial of the IJCARS MICCAI 2016 special issue. In: International Journal of Computer Assisted Radiology and Surgery. 2017 ; Vol. 12, No. 8. pp. 1243-1244.
  4. White, Sara L. ; Pasupathy, Dharmintra ; Sattar, Naveed ; Nelson, Scott M. ; Lawlor, Debbie A. ; Briley, Annette L. ; Seed, Paul T. ; Welsh, Paul ; Poston, Lucilla ; UPBEAT Consortium. / Metabolic profiling of gestational diabetes in obese women during pregnancy. In: Diabetologia. 2017 ; Vol. 60, No. 10. pp. 1603-1912.
  5. Sparks, Rachel ; Vakharia, Vejay ; Rodionov, Roman ; Vos, Sjoerd B. ; Diehl, Beate ; Wehner, Tim ; Miserocchi, Anna ; McEvoy, Andrew W. ; Duncan, John S. ; Ourselin, Sebastien. / Anatomy-driven multiple trajectory planning (ADMTP) of intracranial electrodes for epilepsy surgery. In: International Journal of Computer Assisted Radiology and Surgery. 2017 ; Vol. 12, No. 8. pp. 1245-1255.
  6. Nowell, Mark ; Sparks, Rachel ; Zombori, Gergely ; Miserocchi, Anna ; Rodionov, Roman ; Diehl, Beate ; Wehner, Tim ; White, Mark ; Ourselin, Sebastien ; McEvoy, Andrew ; Duncan, John. / Resection planning in extratemporal epilepsy surgery using 3D multimodality imaging and intraoperative MRI. In: British Journal of Neurosurgery. 2017 ; Vol. 31, No. 4. pp. 468-470.
  7. Sharma, Niraj K. ; Pedreira, Carlos ; Centeno, Maria ; Chaudhary, Umair J. ; Wehner, Tim ; França, Lucas G.S. ; Yadee, Tinonkorn ; Murta, Teresa ; Leite, Marco ; Vos, Sjoerd B. ; Ourselin, Sebastien ; Diehl, Beate ; Lemieux, Louis. / A novel scheme for the validation of an automated classification method for epileptic spikes by comparison with multiple observers. In: Clinical Neurophysiology. 2017 ; Vol. 128, No. 7. pp. 1246-1254.
  8. Dwyer, George ; Chadebecq, Francois ; Tella Amo, Marcel ; Bergeles, Christos ; Maneas, Efthymios ; Pawar, Vijay ; Vander Poorten, Emanuel ; Deprest, Jan ; Ourselin, Sebastien ; De Coppi, Paolo ; Vercauteren, Tom ; Stoyanov, Danail. / A Continuum Robot and Control Interface for Surgical Assist in Fetoscopic Interventions. In: IEEE Robotics and Automation Letters. 2017 ; Vol. 2, No. 3. pp. 1656-1663.
  9. Schreiber, Karen ; Breen, Karen ; Cohen, Hannah ; Jacobsen, Soren ; Middeldorp, Saskia ; Pavord, Sue ; Regan, Lesley ; Roccatello, Dario ; Robinson, Susan E. ; Sciascia, Savino ; Seed, Paul T. ; Watkins, Linda ; Hunt, Beverley J. / HYdroxychloroquine to Improve Pregnancy Outcome in Women with AnTIphospholipid Antibodies (HYPATIA) Protocol : A Multinational Randomized Controlled Trial of Hydroxychloroquine versus Placebo in Addition to Standard Treatment in Pregnant Women with Antiphospholipid Syndrome or Antibodies. In: Seminars in Thrombosis and Hemostasis. 2017.
  10. Bousse, Alexandre ; Manber, Richard ; Holman, Beverley F. ; Atkinson, David ; Arridge, Simon ; Ourselin, Sebastien ; Hutton, Brian F. ; Thielemans, Kris. / Evaluation of a direct motion estimation/correction method in respiratory-gated PET/MRI with motion-adjusted attenuation. In: Medical Physics. 2017 ; Vol. 44, No. 6. pp. 2379-2390.
  11. Vakharia, Vejay N. ; Sparks, Rachel ; O'Keeffe, Aidan G. ; Rodionov, Roman ; Miserocchi, Anna ; McEvoy, Andrew ; Ourselin, Sebastien ; Duncan, John. / Accuracy of intracranial electrode placement for stereoencephalography : A systematic review and meta-analysis. In: Epilepsia. 2017 ; Vol. 58, No. 6. pp. 921-932.
  12. Premi, Enrico ; Grassi, Mario ; Van Swieten, John ; Galimberti, Daniela ; Graff, Caroline ; Masellis, Mario ; Tartaglia, Carmela ; Tagliavini, Fabrizio ; Rowe, James B. ; Laforce, Robert ; Finger, Elizabeth ; Frisoni, Giovanni B. ; De Mendonça, Alexandre ; Sorbi, Sandro ; Gazzina, Stefano ; Cosseddu, Maura ; Archetti, Silvana ; Gasparotti, Roberto ; Manes, Marta ; Alberici, Antonella ; Cardoso, Manuel J. ; Bocchetta, Martina ; Cash, David M. ; Ourselin, Sebastian ; Padovani, Alessandro ; Rohrer, Jonathan D. ; Borroni, Barbara. / Cognitive reserve and TMEM106B genotype modulate brain damage in presymptomatic frontotemporal dementia : A GENFI study. In: Brain. 2017 ; Vol. 140, No. 6. pp. 1784-1791.
  13. Cordeiro, Maria F. ; Normando, Eduardo M. ; Cardoso, M. Jorge ; Miodragovic, Serge ; Jeylani, Seham ; Davis, Benjamin M. ; Guo, Li ; Ourselin, Sebastien ; A'Hern, Roger ; Bloom, Philip A. / Real-time imaging of single neuronal cell apoptosis in patients with glaucoma. In: Brain. 2017 ; Vol. 140, No. 6. pp. 1757-1767.
  14. Bergeles, Christos ; Dubis, Adam M. ; Davidson, Benjamin ; Kasilian, Melissa ; Kalitzeos, Angelos ; Carroll, Joseph ; Dubra, Alfredo ; Michaelides, Michel ; Ourselin, Sebastien. / Unsupervised identification of cone photoreceptors in non-confocal adaptive optics scanning light ophthalmoscope images. In: Biomedical Optics Express. 2017 ; Vol. 8, No. 6.
  15. Moriconi, Stefano ; Zuluaga, Maria A. ; Jäger, H. Rolf ; Nachev, Parashkev ; Ourselin, Sébastien ; Cardoso, M. Jorge. / VTrails : Inferring vessels with geodesic connectivity trees. Information Processing in Medical Imaging - 25th International Conference, IPMI 2017, Proceedings. Vol. 10265 LNCS Springer Verlag, 2017. pp. 672-684 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
  16. Prados, Ferran ; Ashburner, John ; Blaiotta, Claudia ; Brosch, Tom ; Carballido-Gamio, Julio ; Cardoso, Manuel Jorge ; Conrad, Benjamin N. ; Datta, Esha ; Dávid, Gergely ; Leener, Benjamin De ; Dupont, Sara M. ; Freund, Patrick ; Wheeler-Kingshott, Claudia A.M.Gandini ; Grussu, Francesco ; Henry, Roland ; Landman, Bennett A. ; Ljungberg, Emil ; Lyttle, Bailey ; Ourselin, Sebastien ; Papinutto, Nico ; Saporito, Salvatore ; Schlaeger, Regina ; Smith, Seth A. ; Summers, Paul ; Tam, Roger ; Yiannakas, Marios C. ; Zhu, Alyssa ; Cohen-Adad, Julien. / Spinal cord grey matter segmentation challenge. In: NeuroImage. 2017 ; Vol. 152. pp. 312-329.
  17. Burgos, Ninon ; Guerreiro, Filipa ; McClelland, Jamie ; Presles, Benoit ; Modat, Marc ; Nill, Simeon ; Dearnaley, David ; DeSouza, Nandita ; Oelfke, Uwe ; Knopf, Antje Christin ; Ourselin, Sebastien ; Jorge Cardoso, M. / Iterative framework for the joint segmentation and CT synthesis of MR images : Application to MRI-only radiotherapy treatment planning. In: Physics in Medicine and Biology. 2017 ; Vol. 62, No. 11. pp. 4237-4253.
  18. Lane, Christopher A. ; Parker, Thomas D. ; Cash, Dave M. ; Macpherson, Kirsty ; Donnachie, Elizabeth ; Murray-Smith, Heidi ; Barnes, Anna ; Barker, Suzie ; Beasley, Daniel G. ; Bras, Jose ; Brown, David ; Burgos, Ninon ; Byford, Michelle ; Cardoso, M. Jorge ; Carvalho, Ana ; Collins, Jessica ; De Vita, Enrico ; Dickson, John C. ; Epie, Norah ; Espak, Miklos ; Henley, Susie M. D. ; Hoskote, Chandrashekar ; Hutel, Michael ; Klimova, Jana ; Malone, Ian B. ; Markiewicz, Pawel ; Melbourne, Andrew ; Modat, Marc ; Schrag, Anette ; Shah, Sachit ; Sharma, Nikhil ; Sudre, Carole H. ; Thomas, David L. ; Wong, Andrew ; Zhang, Hui ; Hardy, John ; Zetterberg, Henrik ; Ourselin, Sebastien ; Crutch, Sebastian J. ; Kuh, Diana ; Richards, Marcus ; Fox, Nick C. ; Schott, Jonathan M. / Study protocol: Insight 46 : a neuroscience sub-study of the MRC National Survey of Health and Development. In: BMC Neurology. 2017 ; Vol. 17.
  19. Holmes, Holly E. ; Powell, Nick M. ; Ma, Da ; Ismail, Ozama ; Harrison, Ian F. ; Wells, Jack A. ; Colgan, Niall ; O’Callaghan, James M. ; Johnson, Ross A. ; Murray, Tracey K. ; Ahmed, Zeshan ; Heggenes, Morten ; Fisher, Alice ; Cardoso, M. Jorge ; Modat, Marc ; O’Neill, Michael J. ; Collins, Emily C. ; Fisher, Elizabeth M.C. ; Ourselin, Sébastien ; Lythgoe, Mark F. / Comparison of In vivo and Ex vivo MRI for the detection of structural abnormalities in a mouse model of tauopathy. In: Frontiers in Neuroinformatics. 2017 ; Vol. 11.
  20. Patel, Rima ; Moffatt, James D ; Mourmoura, Evangelia ; Demaison, Luc ; Seed, Paul T ; Poston, Lucilla ; Tribe, Rachel M. / Effect of reproductive ageing on pregnant mouse uterus and cervix. In: The Journal of physiology. 2017 ; Vol. 595, No. 6. pp. 2065–2084.
  21. FReJA ; Clayton, Emma L. ; Mancuso, Renzo ; Tolstrup Nielsen, Troels ; Mizielinska, Sarah ; Holmes, Holly ; Powell, Nicholas ; Norona, Frances ; Overgaard Larsen, Jytte ; Milioto, Carmelo ; Wilson, Katherine M. ; Lythgoe, Mark F. ; Ourselin, Sebastian ; Nielsen, Jörgen E. ; Johannsen, Peter ; Holm, Ida ; Collinge, John ; Oliver, Peter L. ; Gomez-Nicola, Diego ; Isaacs, Adrian M. ; Gade, Anders ; Englund, Elisabet ; Fisher, Elizabeth ; Brown, Jeremy ; Stockholm, Jette ; Roos, Peter ; Gydesen, Susanne ; Lindquist, Suzanne ; Thusgaard, Tove. / Early microgliosis precedes neuronal loss and behavioural impairment in mice with a frontotemporal dementia-causing CHMP2B mutation. In: Human Molecular Genetics. 2017 ; Vol. 26, No. 5. pp. 873-887.
  22. Guerreiro, F. ; Burgos, N. ; Dunlop, A. ; Wong, K. ; Petkar, I. ; Nutting, C. ; Harrington, K. ; Bhide, S. ; Newbold, K. ; Dearnaley, D. ; deSouza, N. M. ; Morgan, V. A. ; McClelland, J. ; Nill, S. ; Cardoso, M. J. ; Ourselin, S. ; Oelfke, U. ; Knopf, A. C. / Evaluation of a multi-atlas CT synthesis approach for MRI-only radiotherapy treatment planning. In: Physica Medica. 2017 ; Vol. 35. pp. 7-17.
  23. Carass, Aaron ; Roy, Snehashis ; Jog, Amod ; Cuzzocreo, Jennifer L. ; Magrath, Elizabeth ; Gherman, Adrian ; Button, Julia ; Nguyen, James ; Prados, Ferran ; Sudre, Carole H. ; Jorge Cardoso, Manuel ; Cawley, Niamh ; Ciccarelli, Olga ; Wheeler-Kingshott, Claudia A.M. ; Ourselin, Sébastien ; Catanese, Laurence ; Deshpande, Hrishikesh ; Maurel, Pierre ; Commowick, Olivier ; Barillot, Christian ; Tomas-Fernandez, Xavier ; Warfield, Simon K. ; Vaidya, Suthirth ; Chunduru, Abhijith ; Muthuganapathy, Ramanathan ; Krishnamurthi, Ganapathy ; Jesson, Andrew ; Arbel, Tal ; Maier, Oskar ; Handels, Heinz ; Iheme, Leonardo O. ; Unay, Devrim ; Jain, Saurabh ; Sima, Diana M. ; Smeets, Dirk ; Ghafoorian, Mohsen ; Platel, Bram ; Birenbaum, Ariel ; Greenspan, Hayit ; Bazin, Pierre Louis ; Calabresi, Peter A. ; Crainiceanu, Ciprian M. ; Ellingsen, Lotta M. ; Reich, Daniel S. ; Prince, Jerry L. ; Pham, Dzung L. / Longitudinal multiple sclerosis lesion segmentation : Resource and challenge. In: NeuroImage. 2017 ; Vol. 148. pp. 77-102.
  24. Fiford, Cassidy M. ; Manning, Emily N. ; Bartlett, Jonathan W. ; Cash, David M. ; Malone, Ian B. ; Ridgway, Gerard R. ; Lehmann, Manja ; Leung, Kelvin K. ; Sudre, Carole H. ; Ourselin, Sebastien ; Biessels, Geert Jan ; Carmichael, Owen T. ; Fox, Nick C. ; Cardoso, M. Jorge ; Barnes, Josephine ; for the Alzheimer's Disease Neuroimaging Initiative. / White matter hyperintensities are associated with disproportionate progressive hippocampal atrophy. In: Hippocampus. 2017 ; Vol. 27, No. 3. pp. 249-262.
  25. Xie, Yijing ; Thom, Maria ; Miserocchi, Anna ; McEvoy, Andrew W. ; Desjardins, Adrien ; Ourselin, Sebastien ; Vercauteren, Tom. / Multi-scale spectrally resolved quantitative fluorescence imaging system : Towards neurosurgical guidance in glioma resection. Clinical and Translational Neurophotonics. Vol. 10050 SPIE, 2017.
  26. Sunkara, Sesh K. ; Lamarca, Antonio ; Polyzos, Nikolaos P. ; Seed, Paul T. ; Khalaf, Yakoub. / Reply : Rapid changes in practice make analysis of historical databases irrelevant for contemporary counselling. In: Human reproduction (Oxford, England). 2017 ; Vol. 32, No. 4. pp. 964-965.
  27. Nikitichev, Daniil I. ; Shakir, Dzhoshkun I. ; Chadebecq, François ; Tella, Marcel ; Deprest, Jan ; Stoyanov, Danail ; Ourselin, Sébastien ; Vercauteren, Tom. / Medical-grade sterilizable target for fluid-immersed fetoscope optical distortion calibration. In: Journal of Visualized Experiments. 2017 ; Vol. 2017, No. 120.
  28. García-Peraza-Herrera, Luis C. ; Li, Wenqi ; Gruijthuijsen, Caspar ; Devreker, Alain ; Attilakos, George ; Deprest, Jan ; Poorten, Emmanuel Vander ; Stoyanov, Danail ; Vercauteren, Tom ; Ourselin, Sébastien. / Real-time segmentation of non-rigid surgical tools based on deep learning and tracking. Computer-Assisted and Robotic Endoscopy - 3rd International Workshop, CARE 2016 Held in Conjunction with MICCAI 2016, Revised Selected Papers. Vol. 10170 LNCS Springer Verlag, 2017. pp. 84-95 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
  29. Ladefoged, Claes N. ; Law, Ian ; Anazodo, Udunna ; Lawrence, Keith St. ; Izquierdo-Garcia, David ; Catana, Ciprian ; Burgos, Ninon ; Cardoso, M. Jorge ; Ourselin, Sebastien ; Hutton, Brian ; Mérida, Inés ; Costes, Nicolas ; Hammers, Alexander ; Benoit, Didier ; Holm, Søren ; Juttukonda, Meher ; An, Hongyu ; Cabello, Jorge ; Lukas, Mathias ; Nekolla, Stephan ; Ziegler, Sibylle ; Fenchel, Matthias ; Jakoby, Bjoern ; Casey, Michael E. ; Benzinger, Tammie ; Højgaard, Liselotte ; Hansen, Adam E. ; Andersen, Flemming L. / A multi-centre evaluation of eleven clinically feasible brain PET/MRI attenuation correction techniques using a large cohort of patients. In: NeuroImage. 2017 ; Vol. 147. pp. 346-359.
  30. Brown, J. William L. ; Pardini, Matteo ; Brownlee, Wallace J. ; Fernando, Kryshani ; Samson, Rebecca S. ; Carrasco, Ferran Prados ; Ourselin, Sebastien ; Gandini Wheeler-Kingshott, Claudia A.M. ; Miller, David H. ; Chard, Declan T. / An abnormal periventricular magnetization transfer ratio gradient occurs early in multiple sclerosis. In: Brain. 2017 ; Vol. 140, No. 2. pp. 387-398.
  31. Doel, Tom ; Shakir, Dzhoshkun I. ; Pratt, Rosalind ; Aertsen, Michael ; Moggridge, James ; Bellon, Erwin ; David, Anna L. ; Deprest, Jan ; Vercauteren, Tom ; Ourselin, Sébastien. / GIFT-Cloud : A data sharing and collaboration platform for medical imaging research. In: Computer Methods and Programs in Biomedicine. 2017 ; Vol. 139. pp. 181-190.
  32. Xia, W. ; Noimark, S. ; Maneas, E. ; Parkin, I. ; Ourselin, S. ; Finlay, M ; Desjardins, A. / Photoacoustic imaging of intracardiac medical devices using internal illumination of carbon nanotube / PDMS composite coatings. Photons Plus Ultrasound: Imaging and Sensing 2017, Photonics West. 2017.
  33. Ebner, Michael ; Chouhan, Manil ; Patel, Premal A. ; Atkinson, David ; Amin, Zahir ; Read, Samantha ; Punwani, Shonit ; Taylor, Stuart ; Vercauteren, Tom ; Ourselin, Sébastien. / Point-Spread-Function-Aware Slice-to-Volume Registration: Application to Upper Abdominal MRI Super-Resolution : Application to upper abdominal MRI super-resolution. Reconstruction, Segmentation, and Analysis of Medical Images - 1st International Workshops, RAMBO 2016 and HVSMR 2016 Held in Conjunction with MICCAI 2016, Revised Selected Papers. Vol. 10129 Springer Verlag, 2017. pp. 3-13 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
  34. Zuluaga, Maria A. ; Biff, Benedetta ; Taylor, Andrew M. ; Schievano, Silvia ; Vercauteren, Tom ; Ourselin, Sébastien. / Strengths and pitfalls of whole-heart atlas-based segmentation in congenital heart disease patients. Reconstruction, Segmentation, and Analysis of Medical Images - 1st International Workshops, RAMBO 2016 and HVSMR 2016 Held in Conjunction with MICCAI 2016, Revised Selected Papers. Vol. 10129 LNCS Springer Verlag, 2017. pp. 139-146 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
  35. Desjardins, A. ; Mosse, C. ; Colchester, R. ; Noimark, S. ; Alles, E. ; Zhang, E. ; Ourselin, S. ; Parkin, I. ; Papakonstantinou, I. ; Beard, P. ; Finlay, M. / All-optical pulse-echo ultrasound imaging for guiding minimally invasive procedures. CLEO: Applications and Technology, CLEO_AT 2017. Vol. Part F43-CLEO_AT 2017 OSA - The Optical Society, 2017.
  36. Owen, David ; Melbourne, Andrew ; Eaton-Rosen, Zach ; Thomas, David L. ; Marlow, Neil ; Rohrer, Jonathan ; Ourselin, Sebastien. / Anatomy-driven modelling of spatial correlation for regularisation of arterial spin labelling images. Medical Image Computing and Computer Assisted Intervention − MICCAI 2017 - 20th International Conference, Proceedings. Vol. 10434 LNCS Springer Verlag, 2017. pp. 190-197 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
  37. Thompson, Stephen ; Meurer, Yannic ; Edwards, Eddie ; Ramalhinho, João ; Robu, Maria Ruxandra ; Stoyanov, Danail ; Ourselin, Sébastien ; Davidson, Brian ; Hawkes, David ; Clarkson, Matthew J. / On pattern selection for laparoscope calibration. In: PROCEEDINGS- SPIE THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING. 2017 ; Vol. 10135.
  38. Li, Wenqi ; Wang, Guotai ; Fidon, Lucas ; Ourselin, Sebastien ; Cardoso, M. Jorge ; Vercauteren, Tom. / On the compactness, efficiency, and representation of 3D convolutional networks : Brain parcellation as a pretext task. Information Processing in Medical Imaging - 25th International Conference, IPMI 2017, Proceedings. Vol. 10265 LNCS Springer Verlag, 2017. pp. 348-360 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
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