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Research Outputs

  1. 2017
  2. Scalable multimodal convolutional networks for brain tumour segmentation

    Fidon, L., Li, W., Garcia-Peraza-Herrera, L. C., Ekanayake, J., Kitchen, N., Ourselin, S. & Vercauteren, T., 2017, Medical Image Computing and Computer Assisted Intervention − MICCAI 2017 - 20th International Conference, Proceedings. Springer Verlag, Vol. 10435 . p. 285-293 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10435 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  3. Selection bias in the reported performances of AD classification pipelines

    Mendelson, A. F., Zuluaga, M. A., Lorenzi, M., Hutton, B. F. & Ourselin, S., 2017, In : NeuroImage: Clinical. 14, p. 400-416 17 p.

    Research output: Contribution to journalArticle

  4. Three-dimensional printed ultrasound and photoacoustic training phantoms for vasculature access

    Nikitichev, D. I., Xia, W., West, S. J., Desjardins, A. E., Ourselin, S. & Vercauteren, T., 2017, Proc. SPIE 10064, Photons Plus Ultrasound: Imaging and Sensing 2017. Vol. 10064. (Proceedings of SPIE).

    Research output: Chapter in Book/Report/Conference proceedingMeeting abstract

  5. White matter hyperintensities are seen only in GRN mutation carriers in the GENFI cohort

    Sudre, C. H., Bocchetta, M., Cash, D., Thomas, D. L., Woollacott, I., Dick, K. M., van Swieten, J., Borroni, B., Galimberti, D., Masellis, M., Tartaglia, M. C., Rowe, J. B., Graff, C., Tagliavini, F., Frisoni, G., Laforce, R., Finger, E., de Mendonça, A., Sorbi, S., Ourselin, S. & 3 others, Cardoso, M. J., Rohrer, J. D. & Genetic FTD Initiative, GENFI, 2017, In : NeuroImage: Clinical. 15, p. 171-180 10 p.

    Research output: Contribution to journalArticle

  6. Wide-field spectrally resolved quantitative fluorescence imaging system: toward neurosurgical guidance in glioma resection

    Xie, Y., Thom, M., Ebner, M., Wykes, V., Desjardins, A., Miserocchi, A., Ourselin, S., McEvoy, A. W. & Vercauteren, T., 2017, In : Journal of Biomedical Optics. 22, 11, p. 1-14 14 p., 116006.

    Research output: Contribution to journalArticle

  7. 2016
  8. A Combined EM and Visual Tracking Probabilistic Model for Robust Mosaicking: Application to Fetoscopy

    Tella, M., Daga, P., Chadebecq, F., Thompson, S., Shakir, D. I., Dwyer, G., Wimalasundera, R., Deprest, J., Stoyanov, D., Vercauteren, T. & Ourselin, S., 19 Dec 2016, Proceedings - 29th IEEE Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2016. IEEE Computer Society, p. 524-532 9 p. 7789562

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  9. Carbon-Nanotube–PDMS Composite Coatings on Optical Fibers for All-Optical Ultrasound Imaging

    Noimark, S., Colchester, R. J., Blackburn, B. J., Zhang, E. Z., Alles, E. J., Ourselin, S., Beard, P. C., Papakonstantinou, I., Parkin, I. P. & Desjardins, A. E., 13 Dec 2016, In : Advanced Functional Materials. 26, 46, p. 8390-8396 7 p.

    Research output: Contribution to journalArticle

  10. A Multicenter Cohort Study of Histologic Findings and Long-Term Outcomes of Kidney Disease in Women Who Have Been Pregnant

    Webster, P., Webster, L. M., Cook, H. T., Horsfield, C., Seed, P. T., Vaz, R., Santos, C., Lydon, I., Homsy, M., Lightstone, L. & Bramham, K., 9 Dec 2016, In : Clinical journal of the American Society of Nephrology : CJASN.

    Research output: Contribution to journalArticle

  11. Early Antenatal Prediction of Gestational Diabetes in Obese Women: Development of Prediction Tools for Targeted Intervention

    White, S. L., Lawlor, D. A., Briley, A. L., Godfrey, K. M., Nelson, S. M., Oteng-Ntim, E., Robson, S. C., Sattar, N., Seed, P. T., Costa Vieira, M., Welsh, P., Whitworth, M., Poston, L., Pasupathy, D. & UPBEAT Consortium, 8 Dec 2016, In : PLoS ONE. 11, 12, 17 p., e0167846.

    Research output: Contribution to journalArticle

  12. Macroprolactinomas and Nonfunctioning Pituitary Adenomas and Pregnancy Outcomes

    Lambert, K., Rees, K., Seed, P. T., Dhanjal, M. K., Knight, M., McCance, D. R. & Williamson, C., 2 Dec 2016, In : Obstetrics and Gynecology. 10 p.

    Research output: Contribution to journalArticle

  13. Slic-Seg: A minimally interactive segmentation of the placenta from sparse and motion-corrupted fetal MRI in multiple views

    Wang, G., Zuluaga, M. A., Pratt, R., Aertsen, M., Doel, T., Klusmann, M., David, A. L., Deprest, J., Vercauteren, T. & Ourselin, S., 1 Dec 2016, In : Medical Image Analysis. 34, p. 137-147 11 p.

    Research output: Contribution to journalArticle

  14. Dietary patterns in obese pregnant women; Influence of a behavioral intervention of diet and physical activity in the UPBEAT randomized controlled trial

    Flynn, A. C., Seed, P. T., Patel, N., Barr, S., Bell, R., Briley, A. L., Godfrey, K. M., Nelson, S. M., Oteng-Ntim, E., Robinson, S. M., Sanders, T. A., Sattar, N., Wardle, J., Poston, L. & Goff, L. M., 29 Nov 2016, In : The international journal of behavioral nutrition and physical activity. 13, 1, 124.

    Research output: Contribution to journalArticle

  15. Presymptomatic cortical thinning in familial Alzheimer disease

    Weston, P. S. J., Nicholas, J. M., Lehmann, M., Ryan, N. S., Liang, Y., Macpherson, K., Modat, M., Rossor, M. N., Schott, J. M., Ourselin, S. & Fox, N. C., 8 Nov 2016, In : Neurology. 87, 19, p. 2050-2057 8 p.

    Research output: Contribution to journalArticle

  16. Relationship of grey and white matter abnormalities with distance from the surface of the brain in multiple sclerosis

    Pardini, M., Sudre, C. H., Prados, F., Yaldizli, Ö., Sethi, V., Muhlert, N., Samson, R. S., Van De Pavert, S. H., Cardoso, M. J., Ourselin, S., Gandini Wheeler-Kingshott, C. A. M., Miller, D. H. & Chard, D. T., 1 Nov 2016, In : Journal of Neurology, Neurosurgery and Psychiatry. 87, 11, p. 1212-1217 6 p.

    Research output: Contribution to journalArticle

  17. Fully automated grey and white matter spinal cord segmentation

    Prados, F., Cardoso, M. J., Yiannakas, M. C., Hoy, L. R., Tebaldi, E., Kearney, H., Liechti, M. D., Miller, D. H., Ciccarelli, O., Wheeler-Kingshott, C. A. M. G. & Ourselin, S., 27 Oct 2016, In : Scientific Reports. 6, 36151.

    Research output: Contribution to journalArticle

  18. 3D ultrasonic needle tracking with a 1.5D transducer array for guidance of fetal interventions

    Xia, W., West, S. J., Mari, J. M., Ourselin, S., David, A. L. & Desjardins, A. E., 17 Oct 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer Verlag, Vol. 9900 LNCS. p. 353-361 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9900 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  19. Placental Growth Factor (PlGF) in Women with Suspected Pre-Eclampsia Prior to 35 Weeks' Gestation: A Budget Impact Analysis

    Duckworth, S., Chappell, L. C., Seed, P. T., Mackillop, L., Shennan, A. H. & Hunter, R., 14 Oct 2016, In : PLoS ONE. 11, 10, p. e0164276 12 p.

    Research output: Contribution to journalArticle

  20. Reduced field-of-view diffusion-weighted imaging of the lumbosacral enlargement: A pilot in vivo study of the healthy spinal cord at 3t

    Yiannakas, M. C., Grussu, F., Louka, P., Prados, F., Samson, R. S., Battiston, M., Altmann, D. R., Ourselin, S., Miller, D. H. & Gandini Wheeler-Kingshott, C. A. M., 14 Oct 2016, In : PLoS ONE. 11, 10, e0164890.

    Research output: Contribution to journalArticle

  21. Bilateral weighted adaptive local similarity measure for registration in neurosurgery

    Kochan, M., Modat, M., Vercauteren, T., White, M., Mancini, L., Winston, G. P., McEvoy, A. W., Thornton, J. S., Yousry, T., Duncan, J. S., Ourselin, S. & Stoyanov, D., 2 Oct 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer Verlag, Vol. 9902 LNCS. p. 81-88 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9902 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  22. Dynamically balanced online random forests for interactive scribble-based segmentation

    Wang, G., Zuluaga, M. A., Pratt, R., Aertsen, M., Doel, T., Klusmann, M., David, A. L., Deprest, J., Vercauteren, T. & Ourselin, S., 2 Oct 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer Verlag, Vol. 9901 LNCS. p. 352-360 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9901 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  23. Longitudinal analysis of the preterm cortex using multi-modal spectral matching

    Orasanu, E., Bazin, P. L., Melbourne, A., Lorenzi, M., Lombaert, H., Robertson, N. J., Kendall, G., Weiskopf, N., Marlow, N. & Ourselin, S., 2 Oct 2016, In : Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 9900 LNCS, p. 255-263 9 p.

    Research output: Contribution to journalConference paper

  24. Optimisation of arterial spin labelling using bayesian experimental design

    Owen, D., Melbourne, A., Thomas, D., de Vita, E., Rohrer, J. & Ourselin, S., 2 Oct 2016, In : Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 9902 LNCS, p. 511-518 8 p.

    Research output: Contribution to journalConference paper

  25. A multi-time-point modality-agnostic patch-based method for lesion filling in multiple sclerosis

    Prados, F., Cardoso, M. J., Kanber, B., Ciccarelli, O., Kapoor, R., Gandini Wheeler-Kingshott, C. A. M. & Ourselin, S., 1 Oct 2016, In : NeuroImage. 139, p. 376-384 9 p.

    Research output: Contribution to journalArticle

  26. From computer-assisted intervention research to clinical impact: The need for a holistic approach

    Ourselin, S., Emberton, M. & Vercauteren, T., 1 Oct 2016, In : Medical Image Analysis. 33, p. 72-78 7 p.

    Research output: Contribution to journalEditorial

  27. Improved Parameter-Estimation With MRI-Constrained PET Kinetic Modeling: A Simulation Study

    Erlandsson, K., Liljeroth, M., Atkinson, D., Arridge, S., Ourselin, S. & Hutton, B. F., 1 Oct 2016, In : IEEE Transactions on Nuclear Science. 63, 5, p. 2464-2470 7 p., 7422171.

    Research output: Contribution to journalArticle

  28. Serum neurofilament light chain protein is a measure of disease intensity in frontotemporal dementia

    Rohrer, J. D., Woollacott, I. O. C., Dick, K. M., Brotherhood, E., Gordon, E., Fellows, A., Toombs, J., Druyeh, R., Cardoso, M. J., Ourselin, S., Nicholas, J. M., Norgren, N., Mead, S., Andreasson, U., Blennow, K., Schott, J. M., Fox, N. C., Warren, J. D. & Zetterberg, H., 27 Sep 2016, In : Neurology. 87, 13, p. 1329-1336 8 p.

    Research output: Contribution to journalArticle

  29. Similarity registration problems for 2D/3D ultrasound calibration

    Vasconcelos, F., Peebles, D., Ourselin, S. & Stoyanov, D., 17 Sep 2016, Computer Vision - 14th European Conference, ECCV 2016, Proceedings. Springer Verlag, Vol. 9910 LNCS. p. 171-187 17 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9910 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  30. Placenta vasculature 3D printed imaging and teaching phantoms

    Nikitichev, D. I., Xia, W., Daher, B., Hill, E. R., Wong, R. Y. J., David, A. L., Desjardins, A. E., Ourselin, S. & Vercauteren, T., 12 Sep 2016, 32nd International Conference on Digital Printing Technologies, NIP 2016 - Technical Program and Proceedings. The Society for Imaging Science and Technology, p. 431-434 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  31. A novel use of arterial spin labelling MRI to demonstrate focal hypoperfusion in individuals with posterior cortical atrophy: A multimodal imaging study

    Lehmann, M., Melbourne, A., Dickson, J. C., Ahmed, R. M., Modat, M., Cardoso, M. J., Thomas, D. L., De Vita, E., Crutch, S. J., Warren, J. D., Mahoney, C. J., Bomanji, J., Hutton, B. F., Fox, N. C., Golay, X., Ourselin, S. & Schott, J. M., 1 Sep 2016, In : Journal of Neurology, Neurosurgery and Psychiatry. 87, 9, p. 1032-1034 3 p.

    Research output: Contribution to journalLetter

  32. Erratum to: Cortical folding of the preterm brain: a longitudinal analysis of extremely preterm born neonates using spectral matching (Brain and Behavior, (2016), 6, (1-17), 10.1002/brb3.488)

    Orasanu, E., Melbourne, A., Cardoso, M. J., Lombaert, H., Kendall, G. S., Robertson, N. J., Marlow, N. & Ourselin, S., 1 Sep 2016, In : Brain and Behavior. 6, 9, e00585.

    Research output: Contribution to journalComment/debate

  33. Fully-automated uMRI morphometric phenotyping of the Tc1 mouse model of down syndrome

    Powell, N. M., Modat, M., Cardoso, M. J., Ma, D., Holmes, H. E., Yu, Y., O'Callaghan, J., Cleary, J. O., Sinclair, B., Wiseman, F. K., Tybulewicz, V. L. J., Fisher, E. M. C., Lythgoe, M. F. & Ourselin, S., 1 Sep 2016, In : PLoS ONE. 11, 9, e0162974.

    Research output: Contribution to journalArticle

  34. Longitudinal in vivo MRI in a Huntington's disease mouse model: Global atrophy in the absence of white matter microstructural damage

    Steventon, J. J., Trueman, R. C., Ma, D., Yhnell, E., Bayram-Weston, Z., Modat, M., Cardoso, J., Ourselin, S., Lythgoe, M., Stewart, A., Rosser, A. E. & Jones, D. K., 1 Sep 2016, In : Scientific Reports. 6, 32423.

    Research output: Contribution to journalArticle

  35. PET Reconstruction with an Anatomical MRI Prior Using Parallel Level Sets

    Ehrhardt, M. J., Markiewicz, P., Liljeroth, M., Barnes, A., Kolehmainen, V., Duncan, J. S., Pizarro, L., Atkinson, D., Hutton, B. F., Ourselin, S., Thielemans, K. & Arridge, S. R., 1 Sep 2016, In : IEEE Transactions on Medical Imaging. 35, 9, p. 2189-2199 11 p., 7452643.

    Research output: Contribution to journalArticle

  36. Joint PET-MR respiratory motion models for clinical PET motion correction

    Manber, R., Thielemans, K., Hutton, B. F., Wan, S., McClelland, J., Barnes, A., Arridge, S., Ourselin, S. & Atkinson, D., 16 Aug 2016, In : Physics in Medicine and Biology. 61, 17, p. 6515-6530 16 p.

    Research output: Contribution to journalArticle

  37. Cortical folding of the preterm brain: a longitudinal analysis of extremely preterm born neonates using spectral matching

    Orasanu, E., Melbourne, A., Cardoso, M. J., Lomabert, H., Kendall, G. S., Robertson, N. J., Marlow, N. & Ourselin, S., 1 Aug 2016, In : Brain and Behavior. 6, 8, e00488.

    Research output: Contribution to journalArticle

  38. Multi-atlas-based attenuation correction for brain 18F-FDG PET imaging using a time-of-flight PET/MR scanner: Comparison with clinical single-atlas-and CT-based attenuation correction

    Sekine, T., Burgos, N., Warnock, G., Huellner, M., Buck, A., Ter Voert, E. E. G. W., Jorge Cardoso, M., Hutton, B. F., Ourselin, S., Veit-Haibach, P. & Delso, G., 1 Aug 2016, In : Journal of Nuclear Medicine. 57, 8, p. 1258-1264 7 p.

    Research output: Contribution to journalArticle

  39. Neurofilament light chain: a biomarker for genetic frontotemporal dementia

    Meeter, L. H., Dopper, E. G., Jiskoot, L. C., Sanchez-Valle, R., Graff, C., Benussi, L., Ghidoni, R., Pijnenburg, Y. A., Borroni, B., Galimberti, D., Laforce, R. J., Masellis, M., Vandenberghe, R., Ber, I. L., Otto, M., van Minkelen, R., Papma, J. M., Rombouts, S. A., Balasa, M., Öijerstedt, L. & 17 others, Jelic, V., Dick, K. M., Cash, D. M., Harding, S. R., Jorge Cardoso, M., Ourselin, S., Rossor, M. N., Padovani, A., Scarpini, E., Fenoglio, C., Tartaglia, M. C., Lamari, F., Barro, C., Kuhle, J., Rohrer, J. D., Teunissen, C. E. & van Swieten, J. C., 1 Aug 2016, In : Annals of Clinical and Translational Neurology. 3, 8, p. 623-636 14 p.

    Research output: Contribution to journalArticle

  40. Evaluation of six registration methods for the human abdomen on clinically acquired CT

    Xu, Z., Lee, C. P., Heinrich, M. P., Modat, M., Rueckert, D., Ourselin, S., Abramson, R. G. & Landman, B. A., Aug 2016, In : IEEE Transactions on Biomedical Engineering. 63, 8, p. 1563-1572 10 p., 7482649.

    Research output: Contribution to journalArticle

  41. Diagnostic Biomarkers in Women With Suspected Preeclampsia in a Prospective Multicenter Study

    Duckworth, S., Griffin, M., Seed, P. T., North, R., Myers, J., Mackillop, L., Simpson, N., Waugh, J., Anumba, D., Kenny, L. C., Redman, C. W. G., Shennan, A. H. & Chappell, L. C., 7 Jul 2016, In : Obstetrics and Gynecology.

    Research output: Contribution to journalArticle

  42. Longitudinal development in the preterm thalamus and posterior white matter: MRI correlations between diffusion weighted imaging and T2 relaxometry

    Melbourne, A., Eaton-Rosen, Z., Orasanu, E., Price, D., Bainbridge, A., Cardoso, M. J., Kendall, G. S., Robertson, N. J., Marlow, N. & Ourselin, S., 1 Jul 2016, In : Human Brain Mapping. 37, 7, p. 2479-2492 14 p.

    Research output: Contribution to journalArticle

  43. NiftyFit: a Software Package for Multi-parametric Model-Fitting of 4D Magnetic Resonance Imaging Data

    Melbourne, A., Toussaint, N., Owen, D., Simpson, I., Anthopoulos, T., De Vita, E., Atkinson, D. & Ourselin, S., 1 Jul 2016, In : Neuroinformatics. 14, 3, p. 319-337 19 p.

    Research output: Contribution to journalArticle

  44. 9 Pregnancy and chronic hypertension: Nifedipine vs labetalol as antihypertensive treatment (the panda study): Anti-hypertensive medications

    Webster, L., Myers, J., Nelson-piercy, C., Watt-Coote, I., Wiesender, C., Seed, P. T. & Chappell, L. C., Jul 2016, In : Pregnancy Hypertension. 6, 3, p. 141 1 p.

    Research output: Contribution to journalMeeting abstract

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