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Research Outputs

  1. 2016
  2. NiftyFit: a Software Package for Multi-parametric Model-Fitting of 4D Magnetic Resonance Imaging Data

    Melbourne, A., Toussaint, N., Owen, D., Simpson, I., Anthopoulos, T., De Vita, E., Atkinson, D. & Ourselin, S., 1 Jul 2016, In : Neuroinformatics. 14, 3, p. 319-337 19 p.

    Research output: Contribution to journalArticle

  3. 9 Pregnancy and chronic hypertension: Nifedipine vs labetalol as antihypertensive treatment (the panda study): Anti-hypertensive medications

    Webster, L., Myers, J., Nelson-piercy, C., Watt-Coote, I., Wiesender, C., Seed, P. T. & Chappell, L. C., Jul 2016, In : Pregnancy Hypertension. 6, 3, p. 141 1 p.

    Research output: Contribution to journalMeeting abstract

  4. Coded excitation ultrasonic needle tracking: An in vivo study

    Xia, W., Ginsberg, Y., West, S. J., Nikitichev, D. I., Ourselin, S., David, A. L. & Desjardins, A. E., Jul 2016, In : Medical Physics. 43, 7, p. 4065-4073 9 p.

    Research output: Contribution to journalArticle

  5. Hysteroscopy in recurrent in-vitro fertilisation failure (TROPHY): a multicentre, randomised controlled trial

    El-Toukhy, T., Campo, R., Khalaf, Y., Tabanelli, C., Gianaroli, L., Gordts, S. S., Gordts, S., Mestdagh, G., Mardesic, T., Voboril, J., Marchino, G. L., Benedetto, C., Al-Shawaf, T., Sabatini, L., Seed, P. T., Gergolet, M., Grimbizis, G., Harb, H. & Coomarasamy, A., 25 Jun 2016, In : Lancet. 387, 10038, p. 2614-2621 8 p.

    Research output: Contribution to journalArticle

  6. Partial least squares modelling for imaging-genetics in Alzheimer's disease: Plausibility and generalization

    Lorenzi, M., Gutman, B., Hibar, D. P., Altmann, A., Jahanshad, N., Thompson, P. M. & Ourselin, S., 15 Jun 2016, 2016 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2016 - Proceedings. IEEE Computer Society, Vol. 2016-June. p. 838-841 4 p. 7493396

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  7. Rapid processing of PET list-mode data for efficient uncertainty estimation and data analysis

    Markiewicz, P. J., Thielemans, K., Schott, J. M., Atkinson, D., Arridge, S. R., Hutton, B. F. & Ourselin, S., 9 Jun 2016, In : Physics in Medicine and Biology. 61, 13, p. N322-N336

    Research output: Contribution to journalArticle

  8. Comparison of computer-assisted planning and manual planning for depth electrode implantations in epilepsy

    Nowell, M., Sparks, R., Zombori, G., Miserocchi, A., Rodionov, R., Diehl, B., Wehner, T., Baio, G., Trevisi, G., Tisdall, M., Ourselin, S., McEvoy, A. W. & Duncan, J., 1 Jun 2016, In : Journal of Neurosurgery. 124, 6, p. 1820-1828 9 p.

    Research output: Contribution to journalArticle

  9. Combined 2D and 3D tracking of surgical instruments for minimally invasive and robotic-assisted surgery

    Du, X., Allan, M., Dore, A., Ourselin, S., Hawkes, D., Kelly, J. D. & Stoyanov, D., Jun 2016, In : International Journal of Computer Assisted Radiology and Surgery. 11, 6, p. 1109-1119 11 p.

    Research output: Contribution to journalArticle

  10. Hand–eye calibration for rigid laparoscopes using an invariant point

    Thompson, S., Stoyanov, D., Schneider, C., Gurusamy, K., Ourselin, S., Davidson, B., Hawkes, D. & Clarkson, M. J., Jun 2016, In : International Journal of Computer Assisted Radiology and Surgery. 11, 6, p. 1071-1080 10 p.

    Research output: Contribution to journalArticle

  11. Music-of-light stethoscope: A demonstration of the photoacoustic effect

    Nikitichev, D. I., Xia, W., Hill, E., Mosse, C. A., Perkins, T., Konyn, K., Ourselin, S., Desjardins, A. E. & Vercauteren, T., Jun 2016, In : Physics Education. 51, 4, 045015.

    Research output: Contribution to journalArticle

  12. Spatial calibration of a 2D/3D ultrasound using a tracked needle

    Vasconcelos, F., Peebles, D., Ourselin, S. & Stoyanov, D., Jun 2016, In : International Journal of Computer Assisted Radiology and Surgery. 11, 6, p. 1091-1099 9 p.

    Research output: Contribution to journalArticle

  13. A pipeline for 3D multimodality image integration and computer-assisted planning in epilepsy surgery

    Nowell, M., Rodionov, R., Zombori, G., Sparks, R., Rizzi, M., Ourselin, S., Miserocchi, A., McEvoy, A. & Duncan, J., 20 May 2016, In : Journal of Visualized Experiments. 2016, 111, e53450.

    Research output: Contribution to journalArticle

  14. T2 relaxometry in the extremely-preterm brain at adolescence

    Dingwall, N., Chalk, A., Martin, T. I., Scott, C. J., Semedo, C., Le, Q., Orasanu, E., Cardoso, J. M., Melbourne, A., Marlow, N. & Ourselin, S., 1 May 2016, In : Magnetic Resonance Imaging. 34, 4, p. 508-514 7 p.

    Research output: Contribution to journalArticle

  15. PROMISE: first-trimester progesterone therapy in women with a history of unexplained recurrent miscarriages - a randomised, double-blind, placebo-controlled, international multicentre trial and economic evaluation

    Coomarasamy, A., Williams, H., Truchanowicz, E., Seed, P. T., Small, R., Quenby, S., Gupta, P., Dawood, F., Koot, Y. E., Atik, R. B., Bloemenkamp, K. W., Brady, R., Briley, A., Cavallaro, R., Cheong, Y. C., Chu, J., Eapen, A., Essex, H., Ewies, A., Hoek, A. & 18 others, Kaaijk, E. M., Koks, C. A., Li, T-C., MacLean, M., Mol, B. W., Moore, J., Parrott, S., Ross, J. A., Sharpe, L., Stewart, J., Trépel, D., Vaithilingam, N., Farquharson, R. G., Kilby, M. D., Khalaf, Y., Goddijn, M., Regan, L. & Rai, R., May 2016, In : Health technology assessment (Winchester, England). 20, 41, p. 1-92 92 p.

    Research output: Contribution to journalArticle

  16. Multimodal Image Analysis in Alzheimer's Disease via Statistical Modelling of Non-local Intensity Correlations

    Lorenzi, M., Simpson, I. J., Mendelson, A. F., Vos, S. B., Cardoso, M. J., Modat, M., Schott, J. M. & Ourselin, S., 11 Apr 2016, In : Scientific Reports. 6, 22161.

    Research output: Contribution to journalArticle

  17. Brain imaging in the assessment for epilepsy surgery

    Duncan, J. S., Winston, G. P., Koepp, M. J. & Ourselin, S., 1 Apr 2016, In : The Lancet Neurology. 15, 4, p. 420-433 14 p.

    Research output: Contribution to journalReview article

  18. MR Imaging-Guided Partial Volume Correction of PET Data in PET/MR Imaging

    Erlandsson, K., Dickson, J., Arridge, S., Atkinson, D., Ourselin, S. & Hutton, B. F., 1 Apr 2016, In : PET Clinics. 11, 2, p. 161-177 17 p.

    Research output: Contribution to journalReview article

  19. Prognostic and mechanistic potential of progesterone sulfates in intrahepatic cholestasis of pregnancy and pruritus gravidarum

    Abu-Hayyeh, S., Ovadia, C., Lieu, T., Jensen, D. D., Chambers, J., Dixon, P. H., Lövgren-Sandblom, A., Bolier, R., Tolenaars, D., Kremer, A. E., Syngelaki, A., Noori, M., Williams, D., Marin, J. J. G., Monte, M. J., Nicolaides, K. H., Beuers, U., Oude-Elferink, R., Seed, P. T., Chappell, L. & 3 others, Marschall, H-U., Bunnett, N. W. & Williamson, C., Apr 2016, In : Hepatology. 63, 4

    Research output: Contribution to journalArticle

  20. Automatic segmentation of 4D cardiac MR images for extraction of ventricular chambers using a spatio-temporal approach

    Atehortúa, A., Zuluaga, M. A., Ourselin, S., Giraldo, D. & Romero, E., 21 Mar 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 978435

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  21. Real-time mosaicing of fetoscopic videos using SIFT

    Daga, P., Chadebecq, F., Shakir, D. I., Herrera, L. C. G., Tella, M., Dwyer, G., David, A. L., Deprest, J., Stoyanov, D., Vercauteren, T. & Ourselin, S., 18 Mar 2016, Medical Imaging 2016: Image-Guided Procedures, Robotic Interventions, and Modeling. SPIE, Vol. 9786. 97861R

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  22. Exploiting an MRI derived arterial input function to improve the PET simultaneous estimation method: Validation of assumptions

    Sari, H., Erlandsson, K., Barnes, A., Atkinson, D., Arridge, S., Ourselin, S. & Hutton, B. F., 14 Mar 2016, 2014 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2014. Institute of Electrical and Electronics Engineers Inc., 7430769

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  23. An algorithm for direct 4-D PET image reconstruction/non-rigid motion estimation with limited MRI prior information

    Bousse, A., Jiao, J., Pizarro, L., Thielemans, K., Atkinson, D., Ourselin, S., Arridge, S. & Hutton, B. F., 10 Mar 2016, 2014 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2014. Institute of Electrical and Electronics Engineers Inc., 7430828

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  24. Effect of scatter correction when comparing attenuation maps: Application to brain PET/MR

    Burgos, N., Thielemans, K., Cardoso, M. J., Markiewicz, P., Jiao, J., Dickson, J., Duncan, J. S., Atkinson, D., Arridge, S. R., Hutton, B. F. & Ourselin, S., 10 Mar 2016, 2014 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2014. Institute of Electrical and Electronics Engineers Inc., 7430775

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  25. High throughput CUDA implementation of accurate geometric modelling for iterative reconstruction of PET data

    Markiewicz, P. J., Thielemans, K., Ehrhardt, M. J., Jiao, J., Burgos, N., Atkinson, D., Arridge, S. R., Hutton, B. F. & Ourselin, S., 10 Mar 2016, 2014 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2014. Institute of Electrical and Electronics Engineers Inc., 7430963

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  26. Joint reconstruction of PET-MRI by parallel level sets

    Ehrhardt, M. J., Thielemans, K., Pizarro, L., Markiewicz, P., Atkinson, D., Ourselin, S., Hutton, B. F. & Arridge, S. R., 10 Mar 2016, 2014 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2014. Institute of Electrical and Electronics Engineers Inc., 7430895

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  27. Acceleration of hippocampal atrophy rates in asymptomatic amyloidosis

    Andrews, K. A., Frost, C., Modat, M., Cardoso, M. J., AIBL, Rowe, C. C., Villemagne, V., Fox, N. C., Ourselin, S. & Schott, J. M., 1 Mar 2016, In : Neurobiology of Aging. 39, p. 99-107 9 p.

    Research output: Contribution to journalArticle

  28. Imaging the accumulation and suppression of tau pathology using multiparametric MRI

    Holmes, H. E., Colgan, N., Ismail, O., Ma, D., Powell, N. M., O'Callaghan, J. M., Harrison, I. F., Johnson, R. A., Murray, T. K., Ahmed, Z., Heggenes, M., Fisher, A., Cardoso, M. J., Modat, M., Walker-Samuel, S., Fisher, E. M. C., Ourselin, S., O'Neill, M. J., Wells, J. A., Collins, E. C. & 1 others, Lythgoe, M. F., 1 Mar 2016, In : Neurobiology of Aging. 39, p. 184-194 11 p.

    Research output: Contribution to journalArticle

  29. Vital Sign Prediction of Adverse Maternal Outcomes in Women with Hypovolemic Shock: The Role of Shock Index

    El Ayadi, A. M., Nathan, H. L., Seed, P. T., Butrick, E. A., Hezelgrave, N. L., Shennan, A. H. & Miller, S., 22 Feb 2016, In : PLoS ONE. 11, 2, p. e0148729

    Research output: Contribution to journalArticle

  30. Quantitative Fetal Fibronectin at 18 Weeks of Gestation to Predict Preterm Birth in Asymptomatic High-Risk Women

    Hezelgrave Elliott, N., Abbott, D. S., Radford, S. K., Seed, P. T., Girling, J. C., Filmer, J., Tribe, R. M. & Shennan, A. H., 1 Feb 2016, In : Obstetrics and Gynecology. 127, 2, p. 255-263 9 p.

    Research output: Contribution to journalArticle

  31. Maximum-likelihood joint image reconstruction and motion estimation with misaligned attenuation in TOF-PET/CT

    Bousse, A., Bertolli, O., Atkinson, D., Arridge, S., Ourselin, S., Hutton, B. F. & Thielemans, K., 20 Jan 2016, In : Physics in Medicine and Biology. 61, 3, p. L11-L19

    Research output: Contribution to journalArticle

  32. Meyer's loop asymmetry and language lateralisation in epilepsy

    Nowell, M., Vos, S. B., Sidhu, M., Wilcoxen, K., Sargsyan, N., Ourselin, S. & Duncan, J. S., 8 Jan 2016, In : Journal of Neurology, Neurosurgery and Psychiatry. 87, 8, p. 836-842 7 p.

    Research output: Contribution to journalArticle

  33. The habenula: An under-recognised area of importance in frontotemporal dementia?

    Bocchetta, M., Gordon, E., Marshall, C. R., Slattery, C. F., Cardoso, M. J., Cash, D. M., Espak, M., Modat, M., Ourselin, S., Frisoni, G. B., Schott, J. M., Warren, J. D. & Rohrer, J. D., 8 Jan 2016, In : Journal of Neurology, Neurosurgery and Psychiatry. 87, 8, p. 910-912 3 p.

    Research output: Contribution to journalLetter

  34. ASL-incorporated pharmacokinetic modelling of PET data with reduced acquisition time: Application to amyloid imaging

    Scott, C. J., Jiao, J., Melbourne, A., Schott, J. M., Hutton, B. F. & Ourselin, S., 1 Jan 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer Verlag, Vol. 9902 LNCS. p. 406-413 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9902 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  35. An oblique approach to prediction of conversion to alzheimer’s disease with multikernel gaussian processes

    Young, J., Modat, M., Cardoso, M. J., Ashburner, J. & Ourselin, S., 1 Jan 2016, Machine Learning and Interpretation in Neuroimaging - 4th International Workshop, MLINI 2014 and Held at NIPS 2014, Revised Selected Papers. Springer Verlag, Vol. 9444 LNAI. p. 122-128 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9444 LNAI).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  36. Beyond the resolution limit: Diffusion parameter estimation in partial volume

    Eaton-Rosen, Z., Melbourne, A., Jorge Cardoso, M., Marlow, N. & Ourselin, S., 1 Jan 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer Verlag, Vol. 9902 LNCS. p. 605-612 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9902 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  37. Efficient anatomy driven automated multiple trajectory planning for intracranial electrode implantation

    Sparks, R., Zombori, G., Rodionov, R., Zuluaga, M. A., Diehl, B., Wehner, T., Miserocchi, A., McEvoy, A. W., Duncan, J. S. & Ourselin, S., 1 Jan 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer Verlag, Vol. 9900 LNCS. p. 542-550 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9900 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  38. Fitting parametric models of diffusion MRI in regions of partial volume

    Eaton-Rosen, Z., Cardoso, M. J., Melbourne, A., Orasanu, E., Bainbridge, A., Kendall, G. S., Robertson, N. J., Marlow, N. & Ourselin, S., 1 Jan 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97843E

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  39. Fully automated patch-based image restoration: Application to pathology inpainting

    Prados, F., Jorge Cardoso, M., Cawley, N., Kanber, B., Ciccarelli, O., Gandini Wheeler-Kingshott, C. A. M. & Ourselin, S., 1 Jan 2016, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - Second International Workshop, BrainLes 2016, with the Challenges on BRATS, ISLES and mTOP 2016 Held in Conjunction with MICCAI 2016, Revised Selected Papers. Springer Verlag, Vol. 10154 LNCS. p. 3-15 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10154 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  40. Maximum-likelihood joint image reconstruction/motion estimation in attenuation-corrected respiratory gated PET/CT using a single attenuation map

    Bousse, A., Bertolli, O., Atkinson, D., Arridge, S., Ourselin, S., Hutton, B. F. & Thielemans, K., 1 Jan 2016, In : IEEE Transactions on Medical Imaging. 35, 1, p. 217-228 12 p., 7175030.

    Research output: Contribution to journalArticle

  41. 261: Ultrasonic needle tracking for guidance of fetal interventions: 36th Annual Meeting of the Society for Maternal Fetal Medicine

    Ginsberg, Y., Xia, W., West, S. J., Ourselin, S., Nikitichev, D. I., David, A. L. & Desjardins, A. E., 2016, In : American Journal of Obstetrics and Gynecology. 214, 1, Supplement, p. S152-S153

    Research output: Contribution to journalPoster abstract

  42. A multi-resolution multi-model method for coronary centerline extraction based on minimal path

    Jia, D., Shi, W., Rueckert, D., Liu, L., Ourselin, S. & Zhuang, X., 2016, International Conference on Medical Imaging and Augmented Reality. Vol. 9805 LNCS. p. 320-328 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).

    Research output: Chapter in Book/Report/Conference proceedingConference paper

  43. Interventional multispectral photoacoustic imaging with a clinical linear array ultrasound probe for guiding nerve blocks

    Xia, W., West, S. J., Nikitichev, D. I., Ourselin, S., Beard, P. C. & Desjardins, A. E., 2016, Photons Plus Ultrasound: Imaging and Sensing 2016. SPIE, Vol. 9708. 97080C

    Research output: Chapter in Book/Report/Conference proceedingConference paper

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