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Research Outputs

  1. 2019
  2. An artificial intelligence framework for automatic segmentation and volumetry of vestibular schwannomas from contrast-enhanced T1-weighted and high-resolution T2-weighted MRI

    Shapey, J., Wang, G., Dorent, R., Dimitriadis, A., Li, W., Paddick, I., Kitchen, N., Bisdas, S., Saeed, S. R., Ourselin, S., Bradford, R. & Vercauteren, T., 6 Dec 2019, In : Journal of Neurosurgery. p. 1-9 9 p.

    Research output: Contribution to journalArticle

  3. Lifestyle information and commercial weight management groups to support maternal postnatal weight management and positive lifestyle behaviour: the SWAN feasibility randomised controlled trial

    Bick, D., Taylor, C., Bhavnani, V., Healey, A., Seed, P., Roberts, S., Zasada, M., Avery, A., Craig, V., Khazaezadah, N., McMullen, S., O'Connor, S., Oki, B., Oteng Ntim, E., Poston, L. & Ussher, M., 5 Dec 2019, In : BJOG. 27 p.

    Research output: Contribution to journalArticle

  4. Enzymatic quantification of total serum bile acids as a monitoring strategy for women with intrahepatic cholestasis of pregnancy receiving ursodeoxycholic acid treatment: a cohort study

    Borges Manna, L., Ovadia, C., Lövgren-Sandblom, A., Chambers, J., Begum, S., Seed, P., Walker, I., Chappell, L. C., Marschall, H-U. & Williamson, C., 1 Dec 2019, In : BJOG. 126, 13, p. 1633-1640 8 p.

    Research output: Contribution to journalArticle

  5. Evaluation of algorithms for Multi-Modality Whole Heart Segmentation: An open-access grand challenge

    Zhuang, X., Li, L., Payer, C., Štern, D., Urschler, M., Heinrich, M. P., Oster, J., Wang, C., Smedby, Ö., Bian, C., Yang, X., Heng, P-A., Mortazi, A., Bagci, U., Yang, G., Sun, C., Galisot, G., Ramel, J-Y., Brouard, T., Tong, Q. & 14 others, Si, W., Liao, X., Zeng, G., Shi, Z., Zheng, G., Wang, C., MacGillivray, T., Newby, D., Rhode, K., Ourselin, S., Mohiaddin, R., Keegan, J., Firmin, D. & Yang, G., 1 Dec 2019, In : Medical Image Analysis. 58, p. 101537 101537.

    Research output: Contribution to journalArticle

  6. Learning to see the invisible: A data-driven approach to finding the underlying patterns of abnormality in visually normal brain magnetic resonance images in patients with temporal lobe epilepsy

    Bennett, O. F., Kanber, B., Hoskote, C., Cardoso, M. J., Ourselin, S., Duncan, J. S. & Winston, G. P., 1 Dec 2019, In : Epilepsia. 60, 12, p. 2499-2507 9 p.

    Research output: Contribution to journalArticle

  7. Micro-CT and histological investigation of the spatial pattern of feto-placental vascular density

    Aughwane, R., Schaaf, C., Hutchinson, J. C., Virasami, A., Zuluaga, M. A., Sebire, N., Arthurs, O. J., Vercauteren, T., Ourselin, S., Melbourne, A. & David, A. L., Dec 2019, In : Placenta. 88, p. 36-43 8 p.

    Research output: Contribution to journalArticle

  8. Reduced acquisition time PET pharmacokinetic modelling using simultaneous ASL–MRI: proof of concept

    Scott, C. J., Jiao, J., Melbourne, A., Burgos, N., Cash, D. M., De Vita, E., Markiewicz, P. J., O'Connor, A., Thomas, D. L., Weston, P. S. J., Schott, J. M., Hutton, B. F. & Ourselin, S., Dec 2019, In : Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism. 39, 12, p. 2419-2432 14 p.

    Research output: Contribution to journalArticle

  9. Photoacoustic imaging of the human placental vasculature

    Maneas, E., Aughwane, R., Huynh, N., Xia, W., Ansari, R., Kuniyil Ajith Singh, M., Hutchinson, J. C., Sebire, N. J., Arthurs, O. J., Deprest, J., Ourselin, S., Beard, P. C., Melbourne, A., Vercauteren, T., David, A. L. & Desjardins, A. E., 25 Nov 2019, In : Journal of biophotonics. 10 p., e201900167.

    Research output: Contribution to journalArticle

  10. Improved fetal blood oxygenation and placental estimated measurements of diffusion-weighted MRI using data-driven Bayesian modeling

    Flouri, D., Owen, D., Aughwane, R., Mufti, N., Maksym, K., Sokolska, M., Kendall, G., Bainbridge, A., Atkinson, D., Vercauteren, T., Ourselin, S., David, A. L. & Melbourne, A., 19 Nov 2019, In : Magnetic Resonance in Medicine.

    Research output: Contribution to journalArticle

  11. Age and hippocampal volume predict distinct parts of default mode network activity

    De Marco, M., Ourselin, S. & Venneri, A., 5 Nov 2019, In : Scientific Reports. 9, 1, 1 p., 16075.

    Research output: Contribution to journalArticle

  12. Longitudinal spinal cord atrophy in multiple sclerosis using the generalized boundary shift integral

    for the MAGNIMS Study Group, 1 Nov 2019, In : Annals of Neurology. 86, 5, p. 704-713 10 p.

    Research output: Contribution to journalArticle

  13. Pregnancy-related Acute Kidney Injury in pre-eclampsia: risk factors and renal outcomes

    Conti-Ramsden, F. I., Nathan, H. L., De Greeff, A., Hall, D. R., Seed, P. T., Chappell, L. C., Shennan, A. H. & Bramham, K., Nov 2019, In : Hypertension. 74, 5, p. 1144–1151 8 p.

    Research output: Contribution to journalArticle

  14. Super-resolution for upper abdominal MRI: Acquisition and post-processing protocol optimization using brain MRI control data and expert reader validation

    Ebner, M., Patel, P. A., Atkinson, D., Caselton, L., Firmin, L., Amin, Z., Bainbridge, A., De Coppi, P., Taylor, S. A., Ourselin, S., Chouhan, M. D. & Vercauteren, T., Nov 2019, In : Magnetic Resonance in Medicine. 82, 5, p. 1905-1919 15 p.

    Research output: Contribution to journalArticle

  15. Computer-Assisted Planning for Stereoelectroencephalography (SEEG)

    Vakharia, V. N., Sparks, R., Miserocchi, A., Vos, S. B., O’Keeffe, A., Rodionov, R., McEvoy, A. W., Ourselin, S. & Duncan, J. S., 1 Oct 2019, In : Neurotherapeutics. 16, 4, p. 1183-1197 15 p.

    Research output: Contribution to journalArticle

  16. Cortical cerebral blood flow in ageing: effects of haematocrit, sex, ethnicity and diabetes

    Smith, L. A., Melbourne, A., Owen, D., Cardoso, M. J., Sudre, C. H., Tillin, T., Sokolska, M., Atkinson, D., Chaturvedi, N., Ourselin, S., Hughes, A. D., Barkhof, F. & Jäger, H. R., 1 Oct 2019, In : European Radiology. 29, 10, p. 5549-5558 10 p.

    Research output: Contribution to journalArticle

  17. Relationships of maternal body mass index and plasma biomarkers with childhood body mass index and adiposity at 6 years: The Children of SCOPE study

    on behalf of SCOPE consortium, 1 Oct 2019, In : Pediatric Obesity. 14, 10, 12 p., e12537.

    Research output: Contribution to journalArticle

  18. The Effect of Vascular Segmentation Methods on Stereotactic Trajectory Planning for Drug-Resistant Focal Epilepsy: A Retrospective Cohort Study

    Vakharia, V. N., Sparks, R., Vos, S. B., McEvoy, A. W., Miserocchi, A., Ourselin, S. & Duncan, J. S., 1 Oct 2019, In : World Neurosurgery: X. 4, 100057.

    Research output: Contribution to journalArticle

  19. Handheld Active Add-On Control Unit for a Cable-Driven Flexible Endoscope

    Legrand, J., Javaux, A., Ourak, M., Wenmakers, D., Vercauteren, T., Deprest, J., Ourselin, S., Denis, K. & Vander Poorten, E., 20 Sep 2019, In : Front. Robot. AI. 6

    Research output: Contribution to journalArticle

  20. Machine learning classifiers can predict Gleason pattern 4 prostate cancer with greater accuracy than experienced radiologists

    Antonelli, M., Johnston, E. W., Dikaios, N., Cheung, K. K., Sidhu, H. S., Appayya, M. B., Giganti, F., Simmons, L. A. M., Freeman, A., Allen, C., Ahmed, H. U., Atkinson, D., Ourselin, S. & Punwani, S., 1 Sep 2019, In : European Radiology. 29, 9, p. 4754-4764 11 p.

    Research output: Contribution to journalArticle

  21. Multicenter validation of automated trajectories for selective laser amygdalohippocampectomy

    Vakharia, V. N., Sparks, R. E., Li, K., O'Keeffe, A. G., Pérez-García, F., França, L. G. S., Ko, A. L., Wu, C., Aronson, J. P., Youngerman, B. E., Sharan, A., McKhann, G., Ourselin, S. & Duncan, J. S., 1 Sep 2019, In : Epilepsia. 60, 9, p. 1949-1959 11 p.

    Research output: Contribution to journalArticle

  22. Stereoelectroencephalography electrode placement: Detection of blood vessel conflicts

    Li, K., Vakharia, V. N., Sparks, R., Rodionov, R., Vos, S. B., McEvoy, A. W., Miserocchi, A., Wang, M., Ourselin, S. & Duncan, J. S., 1 Sep 2019, In : Epilepsia. 60, 9, p. 1942-1948 7 p.

    Research output: Contribution to journalArticle

  23. Multi-Domain Adaptation in Brain MRI through Paired Consistency and Adversarial Learning

    Orbes-Arteaga, M., Varsavsky, T., Sudre, C. H., Eaton-Rosen, Z., Haddow, L. J., Sørensen, L., Nielsen, M., Pai, A., Ourselin, S., Modat, M., Nachev, P. & Cardoso, M. J., 16 Aug 2019, In : DART 2019. p. 54-62 9 p.

    Research output: Contribution to journalArticle

  24. Pruning strategies for efficient online globally consistent mosaicking in fetoscopy

    Tella-Amo, M., Peter, L., Shakir, D. I., Deprest, J., Stoyanov, D., Vercauteren, T. & Ourselin, S., 7 Aug 2019, In : Journal of medical imaging (Bellingham, Wash.). 6, 3, p. 035001 035001.

    Research output: Contribution to journalArticle

  25. As easy as 1, 2... 4? Uncertainty in counting tasks for medical imaging

    Eaton-Rosen, Z., Varsavsky, T., Ourselin, S. & Cardoso, M. J., 25 Jul 2019, In : Medical Image Computing and Computer Assisted Intervention -- MICCAI. p. 356-364 9 p.

    Research output: Contribution to journalArticle

  26. Longitudinal neuroanatomical and cognitive progression of posterior cortical atrophy

    Firth, N. C., Primativo, S., Marinescu, R. V., Shakespeare, T. J., Suarez-Gonzalez, A., Lehmann, M., Carton, A., Ocal, D., Pavisic, I., Paterson, R. W., Slattery, C. F., Foulkes, A. J. M., Ridha, B. H., Gil-Néciga, E., Oxtoby, N. P., Young, A. L., Modat, M., Cardoso, M. J., Ourselin, S., Ryan, N. S. & 10 others, Miller, B. L., Rabinovici, G. D., Warrington, E. K., Rossor, M. N., Fox, N. C., Warren, J. D., Alexander, D. C., Schott, J. M., Yong, K. X. X. & Crutch, S. J., 1 Jul 2019, In : Brain. 142, 7, p. 2082-2095 14 p.

    Research output: Contribution to journalArticle

  27. Quantifying adherence to antihypertensive medication for chronic hypertension during pregnancy

    Webster, L. M., Reed, K., Myers, J. E., Burns, A., Gupta, P., Patel, P., Wiesender, C., Seed, P. T., Nelson-Piercy, C. & Chappell, L. C., 1 Jul 2019, In : Pregnancy Hypertension. 17, p. 12-14 3 p.

    Research output: Contribution to journalArticle

  28. The impacted foetal head at caesarean section: incidence and techniques used in a single UK institution

    Rice, A., Tydeman, G., Briley, A. & Seed, P. T., 19 Jun 2019, In : Journal of Obstetrics and Gynaecology. 39, 7, p. 948-951 4 p.

    Research output: Contribution to journalArticle

  29. Modeling longitudinal imaging biomarkers with parametric Bayesian multi-task learning

    for ADNI, 5 Jun 2019, In : Human Brain Mapping. 40, 13, p. 3982-4000 19 p.

    Research output: Contribution to journalArticle

  30. Diagnostic Indicators of Superimposed Preeclampsia in Women With CKD

    Wiles, K., Bramham, K., Seed, P. T., Kurlak, L. O., Mistry, H. D., Nelson-piercy, C., Lightstone, L. & Chappell, L. C., 1 Jun 2019, In : Kidney International Reports. 4, 6, p. 842-853 12 p.

    Research output: Contribution to journalArticle

  31. Applying causal models to explore the mechanism of action of simvastatin in progressive multiple sclerosis

    Eshaghi, A., Kievit, R. A., Prados, F., Sudre, C. H., Nicholas, J., Cardoso, M. J., Chan, D., Nicholas, R., Ourselin, S., Greenwood, J., Thompson, A. J., Alexander, D. C., Barkhof, F., Chataway, J. & Ciccarelli, O., 28 May 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 22, p. 11020-11027 8 p.

    Research output: Contribution to journalArticle

  32. Automated fiber tract reconstruction for surgery planning: Extensive validation in language-related white matter tracts

    Mancini, M., Vos, S. B., Vakharia, V. N., O'Keeffe, A. G., Trimmel, K., Barkhof, F., Dorfer, C., Soman, S., Winston, G. P., Wu, C., Duncan, J. S., Sparks, R. & Ourselin, S., 28 May 2019, In : NeuroImage: Clinical. 23, 9 p., 101883.

    Research output: Contribution to journalArticle

  33. POPPIE: Protocol for a randomised controlled pilot trial of continuity of midwifery care for women at increased risk of preterm birth

    Fernandez Turienzo, C., Bick, D., Bollard, M., Brigante, L., Briley, A., Coxon, K., Cross, P., Healey, A., Mehta, M., Melaugh, A., Moulla, J., Seed, P. T., Shennan, A. H., Singh, C., Tribe, R. M. & Sandall, J., 14 May 2019, In : Trials. 20, 1, 271.

    Research output: Contribution to journalArticle

  34. A multi-shell multi-tissue diffusion study of brain connectivity in early multiple sclerosis

    Tur, C., Grussu, F., Prados, F., Charalambous, T., Collorone, S., Kanber, B., Cawley, N., Altmann, D. R., Ourselin, S., Barkhof, F., Clayden, J. D., Toosy, A. T., Wheeler-Kingshott, C. AM. G. & Ciccarelli, O., 10 May 2019, In : Multiple Sclerosis Journal. p. 1-12 12 p.

    Research output: Contribution to journalArticle

  35. Segmentation of medial temporal subregions reveals early right-sided involvement in semantic variant PPA

    Bocchetta, M., Iglesias, J. E., Russell, L. L., Greaves, C. V., Marshall, C. R., Scelsi, M. A., Cash, D. M., Ourselin, S., Warren, J. D. & Rohrer, J. D., 10 May 2019, In : Alzheimer's research & therapy. 11, 1, p. 1-9 41.

    Research output: Contribution to journalArticle

  36. Placental growth factor testing to assess women with suspected pre-eclampsia: a multicentre, pragmatic, stepped-wedge cluster-randomised controlled trial

    Duhig, K. E., Myers, J., Seed, P. T., Sparkes, J., Lowe, J., Hunter, R. M., Shennan, A. H., Chappell, L. C., Bahl, R., Bambridge, G., Barnfield, S., Ficquet, J., Gill, C., Girling, J., Harding, K., Khalil, A., Sharp, A., Simpson, N. & Tuffnell, D., 4 May 2019, In : The Lancet. 393, 10183, p. 1807-1818 12 p.

    Research output: Contribution to journalArticle

  37. Evaluation of Haptic Feedback on Bimanually Teleoperated Laparoscopy for Endometriosis Surgery

    Portoles Diez, S. J., Borghesan, G., Joyeux, L., Meuleman, C., Deprest, J., Stoyanov, D., Ourselin, S., Vercauteren, T., Reynaerts, D. & Vander Poorten, E., 1 May 2019, In : IEEE Transactions on Biomedical Engineering. 66, 5, p. 1207-1221 15 p., 8469020.

    Research output: Contribution to journalArticle

  38. Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks

    Wang, G., Li, W., Aertsen, M., Deprest, J., Ourselin, S. & Vercauteren, T., 21 Apr 2019, In : NEUROCOMPUTING. 338, p. 34-45 12 p.

    Research output: Contribution to journalArticle

  39. Exploring the effect of implementation and context on a stepped-wedge randomised controlled trial of a vital sign triage device in routine maternity care in low-resource settings

    Vousden, N., Lawley, E., Seed, P. T., Gidiri, M. F., Charantimath, U., Makonyola, G., Brown, A., Yadeta, L., Best, R., Chinkoyo, S., Vwalika, B., Nakimuli, A., Ditai, J., Greene, G., Chappell, L. C., Sandall, J., Shennan, A. H., Bukani, D., Toussaint, P., Vixama, A. & 30 others, Hill, C., Nakirijja, E., Birungi, D., Kalyowa, N., Namakuli, D., Byamugisha, J., Odeke, N. M., Wandabwa, J., Momodou, F., Sesay, M., Sandi, P., Conteh, J., Kamara, J., Clarke, M., Miti, J., Chima, M., Kopeka, M., Jere, C., Musonda, T., Mambo, V., Guchale, Y., Surur, F., Mungarwadi, G. M., Mastiholi, S. S., Karadiguddi, C. C., Hezelgrave, N., Duhig, K. E., Kachinjika, M., Bellad, M. & Makwakwa, J., 18 Apr 2019, In : Implementation Science. 14, 1, 38.

    Research output: Contribution to journalArticle

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