Research output: Contribution to journal › Article › peer-review
C. Phillips, K. Butler Gettings, Jonathan L King, D. Ballard, M. Bodner, L. Borsuk, Walther Parson
Original language | English |
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Pages (from-to) | 162-169 |
Number of pages | 8 |
Journal | Forensic Science International: Genetics |
Volume | 34 |
Early online date | 21 Feb 2018 |
DOIs | |
Accepted/In press | 18 Feb 2018 |
E-pub ahead of print | 21 Feb 2018 |
Published | 1 May 2018 |
Additional links |
The devil’s in the detail_PHILLIPS_Publishedonline21February2018_GREEN AAM (CC BY-NC-ND)
The_devil_s_in_the_detail_PHILLIPS_Publishedonline21February2018_GREEN_AAM_CC_BY_NC_ND_.pdf, 1.17 MB, application/pdf
Uploaded date:19 Mar 2018
Version:Accepted author manuscript
Licence:CC BY-NC-ND
The STR sequence template file published in 2016 as part of the considerations from the DNA Commission of the International Society for Forensic Genetics on minimal STR sequence nomenclature requirements, has been comprehensively revised and audited using the latest GRCh38 genome assembly. The list of forensic STRs characterized was expanded by including supplementary autosomal, X- and Y-chromosome microsatellites in less common use for routine DNA profiling, but some likely to be adopted in future massively parallel sequencing (MPS) STR panels. We outline several aspects of sequence alignment and annotation that required care and attention to detail when comparing sequences to GRCh37 and GRCh38 assemblies, as well as the necessary matching of MPS-based allele descriptions to previously established repeat region structures described in initial sequencing studies of the less well known forensic STRs. The revised sequence guide is now available in a dynamically updated FTP format from the STRidER website with a date-stamped change log to allow users to explore their own MPS data with the most up-to-date forensic STR sequence information compiled in a simple guide.
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